Experiment: a-Cyclodextrin 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0605 and BT0606 are separated by 60 nucleotides BT0606 and BT0607 are separated by 6 nucleotides BT0607 and BT0608 are separated by 96 nucleotides
BT0605: BT0605 - putative polysaccharide export protein (NCBI ptt file), at 746,614 to 748,059
BT0605
BT0606: BT0606 - hypothetical protein (NCBI ptt file), at 748,120 to 749,340
BT0606
BT0607: BT0607 - serine O-acetyltransferase (NCBI ptt file), at 749,347 to 749,922
BT0607
BT0608: BT0608 - glycosyltransferase (NCBI ptt file), at 750,019 to 751,098
BT0608
Position (kb) 748
749
750 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 747.149 kb on + strand, within BT0605 at 747.242 kb on + strand, within BT0605 at 747.295 kb on - strand, within BT0605 at 747.441 kb on - strand, within BT0605 at 747.616 kb on + strand, within BT0605 at 747.665 kb on - strand, within BT0605 at 747.665 kb on - strand, within BT0605 at 747.694 kb on + strand, within BT0605 at 747.822 kb on + strand, within BT0605 at 747.823 kb on - strand, within BT0605 at 747.894 kb on + strand, within BT0605 at 747.913 kb on + strand, within BT0605 at 747.914 kb on - strand, within BT0605 at 747.916 kb on - strand at 747.918 kb on - strand at 748.080 kb on - strand at 748.080 kb on - strand at 748.118 kb on - strand at 748.189 kb on + strand at 748.236 kb on - strand at 748.248 kb on - strand, within BT0606 at 748.309 kb on + strand, within BT0606 at 748.388 kb on + strand, within BT0606 at 748.393 kb on + strand, within BT0606 at 748.520 kb on - strand, within BT0606 at 748.646 kb on - strand, within BT0606 at 748.650 kb on - strand, within BT0606 at 748.679 kb on - strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.867 kb on - strand, within BT0606 at 748.871 kb on + strand, within BT0606 at 749.037 kb on + strand, within BT0606 at 749.038 kb on - strand, within BT0606 at 749.089 kb on + strand, within BT0606 at 749.090 kb on - strand, within BT0606 at 749.193 kb on - strand, within BT0606 at 749.236 kb on - strand at 749.286 kb on - strand at 749.302 kb on - strand at 749.407 kb on - strand, within BT0607 at 749.442 kb on + strand, within BT0607 at 749.604 kb on + strand, within BT0607 at 749.605 kb on - strand, within BT0607 at 749.711 kb on + strand, within BT0607 at 749.712 kb on - strand, within BT0607 at 749.775 kb on - strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.807 kb on + strand, within BT0607 at 749.811 kb on + strand, within BT0607 at 749.820 kb on + strand, within BT0607 at 750.039 kb on + strand at 750.040 kb on - strand at 750.040 kb on - strand at 750.041 kb on + strand at 750.041 kb on + strand at 750.141 kb on + strand, within BT0608 at 750.201 kb on - strand, within BT0608 at 750.209 kb on + strand, within BT0608 at 750.268 kb on + strand, within BT0608 at 750.307 kb on + strand, within BT0608 at 750.316 kb on - strand, within BT0608 at 750.324 kb on + strand, within BT0608 at 750.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C) remove 747,149 + BT0605 0.37 +0.0 747,242 + BT0605 0.43 -2.0 747,295 - BT0605 0.47 -1.8 747,441 - BT0605 0.57 +0.0 747,616 + BT0605 0.69 -0.5 747,665 - BT0605 0.73 -0.7 747,665 - BT0605 0.73 -0.2 747,694 + BT0605 0.75 -2.5 747,822 + BT0605 0.84 +1.0 747,823 - BT0605 0.84 -2.0 747,894 + BT0605 0.89 -1.5 747,913 + BT0605 0.90 +0.0 747,914 - BT0605 0.90 +0.0 747,916 - -1.8 747,918 - -0.5 748,080 - +0.0 748,080 - +0.0 748,118 - +0.0 748,189 + -2.0 748,236 - -2.5 748,248 - BT0606 0.10 -2.0 748,309 + BT0606 0.15 -2.0 748,388 + BT0606 0.22 +0.0 748,393 + BT0606 0.22 -1.0 748,520 - BT0606 0.33 -1.0 748,646 - BT0606 0.43 -2.8 748,650 - BT0606 0.43 -2.0 748,679 - BT0606 0.46 -1.3 748,862 + BT0606 0.61 -1.0 748,862 + BT0606 0.61 +0.0 748,867 - BT0606 0.61 -2.4 748,871 + BT0606 0.62 -0.5 749,037 + BT0606 0.75 +0.0 749,038 - BT0606 0.75 -1.0 749,089 + BT0606 0.79 -2.3 749,090 - BT0606 0.79 -2.8 749,193 - BT0606 0.88 -1.0 749,236 - +1.6 749,286 - -0.3 749,302 - +0.0 749,407 - BT0607 0.10 -1.5 749,442 + BT0607 0.16 -1.5 749,604 + BT0607 0.45 -1.0 749,605 - BT0607 0.45 -2.0 749,711 + BT0607 0.63 -1.0 749,712 - BT0607 0.63 -1.3 749,775 - BT0607 0.74 +0.0 749,789 + BT0607 0.77 -1.0 749,789 + BT0607 0.77 -1.5 749,807 + BT0607 0.80 -2.5 749,811 + BT0607 0.81 -1.5 749,820 + BT0607 0.82 -1.0 750,039 + +0.0 750,040 - +0.0 750,040 - +0.0 750,041 + -1.5 750,041 + +0.6 750,141 + BT0608 0.11 -1.5 750,201 - BT0608 0.17 -0.6 750,209 + BT0608 0.18 -1.0 750,268 + BT0608 0.23 -0.7 750,307 + BT0608 0.27 -2.3 750,316 - BT0608 0.28 -1.0 750,324 + BT0608 0.28 -1.0 750,325 - -1.3
Or see this region's nucleotide sequence