Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2835

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
3,533,404	+		BT2834	0.62	-3.2
3,533,405	-		BT2834	0.62	-4.7
3,533,409	+		BT2834	0.62	-2.1
3,533,409	+		BT2834	0.62	-1.1
3,533,410	-		BT2834	0.62	-3.3
3,533,410	-		BT2834	0.62	-0.4
3,533,414	-		BT2834	0.62	-1.1
3,533,552	+		BT2834	0.69	-2.1
3,533,553	-		BT2834	0.69	-3.2
3,533,734	-		BT2834	0.77	-1.1
3,533,750	-		BT2834	0.78	-1.1
3,533,860	+		BT2834	0.84	-1.7
3,533,958	+		BT2834	0.88	-2.1
3,533,969	+		BT2834	0.89	+0.3
3,533,998	-				-2.4
3,533,998	-				-2.4
3,534,003	+				-2.1
3,534,020	-				-0.1
3,534,101	-				-0.7
3,534,138	+				-2.5
3,534,138	+				-0.7
3,534,247	+				-0.1
3,534,251	+				+1.3
3,537,382	+				-1.3
3,537,455	+				+0.9
3,537,474	+				-1.7
3,537,482	-				-3.1
3,537,484	-				-1.1
3,537,512	+				-0.7
3,537,519	+				-1.1
3,537,530	-				-2.5
3,537,534	+				+0.1
3,537,535	-				-1.1
3,537,890	+				-1.1
3,537,891	-				-3.1
3,537,893	+				-3.4
3,537,893	+				-1.1
3,537,894	-				-1.7
3,537,921	+				-3.1
3,537,981	+				-2.1
3,537,981	+				-0.1
3,538,075	+		BT2836	0.12	-5.9
3,538,100	+				-1.1
3,538,101	-		BT2836	0.14	-1.7
3,538,101	-		BT2836	0.14	-1.1
3,538,104	-		BT2836	0.14	-0.1
3,538,164	+		BT2836	0.17	-4.2
3,538,165	-		BT2836	0.17	-0.1
3,538,218	+		BT2836	0.20	-2.4
3,538,284	+				-1.7
3,538,284	+		BT2836	0.23	-5.1
3,538,284	+		BT2836	0.23	-4.3
3,538,285	-		BT2836	0.24	-4.5
3,538,324	-		BT2836	0.26	-3.1
3,538,324	-		BT2836	0.26	-1.7
3,538,324	-		BT2836	0.26	-5.9
3,538,347	+		BT2836	0.27	-1.7
3,538,348	-		BT2836	0.27	-1.8