Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1469

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
1,809,182	+		BT1468	0.54	+1.2
1,809,232	+		BT1468	0.58	+2.0
1,809,242	+		BT1468	0.58	-1.0
1,809,244	+		BT1468	0.59	-0.2
1,809,396	+		BT1468	0.71	+0.0
1,809,485	+		BT1468	0.78	+0.0
1,809,686	+				+1.0
1,809,686	+				-1.5
1,809,688	+				-2.8
1,809,794	+				-1.0
1,809,795	-				-1.1
1,809,832	+				+0.0
1,809,943	-				-1.0
1,810,019	-				-1.5
1,810,030	+				-1.0
1,810,054	+				+1.0
1,810,055	-				-1.5
1,810,164	+				-1.0
1,810,196	+				+2.6
1,810,275	-				+0.0
1,810,730	+		BT1469	0.43	-1.8
1,810,731	-		BT1469	0.43	-0.8
1,810,777	-		BT1469	0.46	-1.3
1,810,849	+		BT1469	0.51	-1.5
1,810,943	+		BT1469	0.58	+0.0
1,810,944	-		BT1469	0.58	-1.0
1,810,952	+		BT1469	0.59	-2.3
1,811,052	-		BT1469	0.66	-2.0
1,811,083	+		BT1469	0.69	+0.0
1,811,144	+		BT1469	0.73	-1.0
1,811,147	+		BT1469	0.73	-2.8
1,811,154	-		BT1469	0.74	-1.0
1,811,157	+		BT1469	0.74	-1.0
1,811,158	-		BT1469	0.74	-2.0
1,811,185	+		BT1469	0.76	-2.0
1,811,201	+		BT1469	0.77	-2.0
1,811,231	+		BT1469	0.79	+0.0
1,811,231	+		BT1469	0.79	-1.5
1,811,240	-		BT1469	0.80	-1.5
1,811,297	+		BT1469	0.84	-1.5
1,811,315	+		BT1469	0.86	-2.9
1,811,390	+				+0.0
1,811,459	+				-1.5
1,811,459	+				+0.8
1,811,460	-				-1.0
1,811,534	+				+0.0
1,811,534	+				-2.5
1,811,534	+				+0.0
1,811,558	+				-0.7
1,811,558	+				-1.5
1,811,559	-				-2.8
1,811,639	-				+1.0
1,811,739	-		BT1470	0.18	+0.6
1,811,741	+		BT1470	0.18	+1.0
1,811,977	+		BT1470	0.37	+0.6
1,812,254	+		BT1470	0.59	+1.0
1,812,404	+		BT1470	0.71	+0.0