Experiment: a-Cyclodextrin 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0606 and BT0607 are separated by 6 nucleotides BT0607 and BT0608 are separated by 96 nucleotides
BT0606: BT0606 - hypothetical protein (NCBI ptt file), at 748,120 to 749,340
BT0606
BT0607: BT0607 - serine O-acetyltransferase (NCBI ptt file), at 749,347 to 749,922
BT0607
BT0608: BT0608 - glycosyltransferase (NCBI ptt file), at 750,019 to 751,098
BT0608
Position (kb) 749
750 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 748.388 kb on + strand, within BT0606 at 748.393 kb on + strand, within BT0606 at 748.520 kb on - strand, within BT0606 at 748.646 kb on - strand, within BT0606 at 748.650 kb on - strand, within BT0606 at 748.679 kb on - strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.862 kb on + strand, within BT0606 at 748.867 kb on - strand, within BT0606 at 748.871 kb on + strand, within BT0606 at 749.037 kb on + strand, within BT0606 at 749.038 kb on - strand, within BT0606 at 749.089 kb on + strand, within BT0606 at 749.090 kb on - strand, within BT0606 at 749.193 kb on - strand, within BT0606 at 749.236 kb on - strand at 749.286 kb on - strand at 749.302 kb on - strand at 749.407 kb on - strand, within BT0607 at 749.442 kb on + strand, within BT0607 at 749.604 kb on + strand, within BT0607 at 749.605 kb on - strand, within BT0607 at 749.711 kb on + strand, within BT0607 at 749.712 kb on - strand, within BT0607 at 749.775 kb on - strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.789 kb on + strand, within BT0607 at 749.807 kb on + strand, within BT0607 at 749.811 kb on + strand, within BT0607 at 749.820 kb on + strand, within BT0607 at 750.039 kb on + strand at 750.040 kb on - strand at 750.040 kb on - strand at 750.041 kb on + strand at 750.041 kb on + strand at 750.141 kb on + strand, within BT0608 at 750.201 kb on - strand, within BT0608 at 750.209 kb on + strand, within BT0608 at 750.268 kb on + strand, within BT0608 at 750.307 kb on + strand, within BT0608 at 750.316 kb on - strand, within BT0608 at 750.324 kb on + strand, within BT0608 at 750.325 kb on - strand at 750.423 kb on - strand, within BT0608 at 750.434 kb on + strand, within BT0608 at 750.434 kb on + strand, within BT0608 at 750.467 kb on + strand, within BT0608 at 750.511 kb on - strand, within BT0608 at 750.553 kb on - strand, within BT0608 at 750.738 kb on - strand, within BT0608 at 750.738 kb on - strand, within BT0608 at 750.769 kb on - strand, within BT0608 at 750.778 kb on + strand, within BT0608 at 750.837 kb on + strand, within BT0608 at 750.870 kb on + strand, within BT0608
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C) remove 748,388 + BT0606 0.22 +0.0 748,393 + BT0606 0.22 -1.0 748,520 - BT0606 0.33 -1.0 748,646 - BT0606 0.43 -2.8 748,650 - BT0606 0.43 -2.0 748,679 - BT0606 0.46 -0.7 748,862 + BT0606 0.61 -1.0 748,862 + BT0606 0.61 +1.0 748,867 - BT0606 0.61 -3.4 748,871 + BT0606 0.62 -0.6 749,037 + BT0606 0.75 +1.0 749,038 - BT0606 0.75 -1.0 749,089 + BT0606 0.79 -2.3 749,090 - BT0606 0.79 -1.8 749,193 - BT0606 0.88 +0.0 749,236 - +0.0 749,286 - -0.7 749,302 - -1.0 749,407 - BT0607 0.10 -1.1 749,442 + BT0607 0.16 -1.6 749,604 + BT0607 0.45 -1.0 749,605 - BT0607 0.45 -2.0 749,711 + BT0607 0.63 -1.0 749,712 - BT0607 0.63 -2.3 749,775 - BT0607 0.74 +0.0 749,789 + BT0607 0.77 -1.0 749,789 + BT0607 0.77 -1.6 749,807 + BT0607 0.80 -2.6 749,811 + BT0607 0.81 -1.6 749,820 + BT0607 0.82 -1.0 750,039 + +0.0 750,040 - +0.0 750,040 - +0.0 750,041 + -1.6 750,041 + -1.0 750,141 + BT0608 0.11 -1.6 750,201 - BT0608 0.17 -2.0 750,209 + BT0608 0.18 -1.0 750,268 + BT0608 0.23 -2.3 750,307 + BT0608 0.27 -2.3 750,316 - BT0608 0.28 -2.0 750,324 + BT0608 0.28 -1.0 750,325 - -2.3 750,423 - BT0608 0.37 +0.0 750,434 + BT0608 0.38 -1.6 750,434 + BT0608 0.38 -1.0 750,467 + BT0608 0.41 -3.0 750,511 - BT0608 0.46 +0.0 750,553 - BT0608 0.49 -1.0 750,738 - BT0608 0.67 -2.6 750,738 - BT0608 0.67 -1.8 750,769 - BT0608 0.69 -1.0 750,778 + BT0608 0.70 -1.0 750,837 + BT0608 0.76 -0.6 750,870 + BT0608 0.79 -1.2
Or see this region's nucleotide sequence