Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4559

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
5,980,185	-				-2.1
5,980,260	+				-3.2
5,980,282	-				-1.6
5,980,537	+		BT4558	0.26	-1.9
5,980,538	-		BT4558	0.26	-1.1
5,980,580	+		BT4558	0.32	-2.4
5,980,580	+		BT4558	0.32	+0.9
5,980,587	+		BT4558	0.33	+0.5
5,980,600	-		BT4558	0.34	-3.2
5,980,743	-		BT4558	0.53	-0.1
5,980,799	+		BT4558	0.61	-1.1
5,980,799	+		BT4558	0.61	-1.6
5,980,821	-		BT4558	0.64	-0.1
5,980,880	+		BT4558	0.72	-1.1
5,980,979	+		BT4558	0.85	-2.9
5,980,979	+		BT4558	0.85	-0.1
5,981,084	-				-0.1
5,981,092	-				-1.8
5,981,152	+				-3.0
5,981,165	+		BT4559	0.13	-0.6
5,981,246	+		BT4559	0.34	-1.6
5,981,246	+		BT4559	0.34	-0.4
5,981,247	-		BT4559	0.35	-1.1
5,981,300	+		BT4559	0.49	+0.5
5,981,369	+		BT4559	0.67	-1.3
5,981,369	+		BT4559	0.67	-0.1
5,981,378	+		BT4559	0.70	-0.2
5,981,380	+		BT4559	0.70	-0.6
5,981,590	-				-1.7
5,981,592	-				+1.9
5,981,598	-				+0.4
5,981,632	+				-0.1
5,981,635	-				-1.1