Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1400

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
1,726,350	+				-0.5
1,726,352	+				+0.5
1,726,352	+				-1.0
1,726,680	+		BT1399	0.38	-1.4
1,726,768	+		BT1399	0.48	-2.2
1,726,768	+		BT1399	0.48	-0.7
1,726,964	+		BT1399	0.70	-2.4
1,727,037	+		BT1399	0.79	+0.5
1,727,100	-		BT1399	0.86	-1.6
1,727,247	+				-0.8
1,727,247	+				-1.2
1,727,247	+				-0.7
1,727,270	+				-0.7
1,727,370	-				-1.1
1,727,479	-		BT1400	0.20	-0.9
1,727,492	+		BT1400	0.22	-1.1
1,727,612	-		BT1400	0.33	-0.1
1,727,642	-		BT1400	0.36	-0.1
1,727,642	-		BT1400	0.36	-1.1
1,727,658	-		BT1400	0.38	-1.1
1,727,770	-		BT1400	0.49	+0.9
1,727,780	+		BT1400	0.50	-2.1
1,727,781	-		BT1400	0.50	-1.1
1,727,819	-		BT1400	0.53	-1.7
1,727,942	-		BT1400	0.65	-1.3
1,727,942	-		BT1400	0.65	-0.1
1,728,045	-		BT1400	0.75	+0.5
1,728,045	-		BT1400	0.75	+0.1
1,728,191	-		BT1400	0.89	+1.5
1,728,213	-				+1.5
1,728,289	+				+0.6
1,728,300	+				-0.9
1,728,300	+				+0.5
1,728,314	-				-1.4
1,728,670	+		BT1401	0.20	-1.5
1,728,672	+		BT1401	0.20	-1.6
1,728,693	-		BT1401	0.22	-2.1
1,728,767	+		BT1401	0.28	-2.2
1,728,767	+		BT1401	0.28	-0.4
1,728,769	+		BT1401	0.28	-2.5
1,728,859	+		BT1401	0.35	-1.1
1,728,884	+				-1.4
1,728,903	+		BT1401	0.39	-0.8
1,728,942	+		BT1401	0.42	+0.9
1,728,961	+		BT1401	0.44	-0.7
1,728,961	+		BT1401	0.44	-1.1
1,729,039	-		BT1401	0.50	-1.7
1,729,088	+		BT1401	0.54	-2.7
1,729,155	-		BT1401	0.60	-2.1
1,729,283	+		BT1401	0.71	-2.1