Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1164

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
1,450,126	+				-0.1
1,450,141	-				-0.7
1,450,212	-				+1.9
1,450,213	+				-0.5
1,450,278	-				-0.7
1,450,280	+				-1.3
1,450,322	+		BT1163	0.10	-2.3
1,450,365	+		BT1163	0.16	-0.7
1,450,425	-		BT1163	0.24	-0.1
1,450,425	-		BT1163	0.24	-0.1
1,450,425	-		BT1163	0.24	-1.1
1,450,429	-		BT1163	0.24	-1.1
1,450,516	+		BT1163	0.36	-1.7
1,450,522	-		BT1163	0.37	-0.7
1,450,602	+		BT1163	0.47	+0.9
1,450,608	-		BT1163	0.48	-0.1
1,450,682	+		BT1163	0.58	-0.1
1,450,745	+		BT1163	0.67	-0.1
1,450,815	-		BT1163	0.76	-1.1
1,450,821	+		BT1163	0.77	+0.9
1,450,821	+		BT1163	0.77	-0.1
1,450,824	+		BT1163	0.77	-0.9
1,450,855	-		BT1163	0.81	-0.1
1,450,934	+				-1.7
1,450,935	-				-1.7
1,450,947	-				-1.3
1,451,012	+				-0.6
1,451,022	-				-1.1
1,451,024	-				-1.1
1,451,059	-				-2.7
1,451,097	-				-0.1
1,451,128	+				-1.1
1,451,133	+				-1.7
1,451,134	-				-1.1
1,451,175	+				-0.9
1,451,233	-		BT1164	0.10	-1.3
1,451,285	+		BT1164	0.13	-1.7
1,451,358	+		BT1164	0.16	-2.7
1,451,358	+		BT1164	0.16	-0.1
1,451,359	-		BT1164	0.16	-1.6
1,451,360	+		BT1164	0.16	-0.1
1,451,406	+		BT1164	0.18	-2.1
1,451,483	+		BT1164	0.21	-1.7
1,451,491	-		BT1164	0.22	-0.1
1,451,519	+		BT1164	0.23	-1.7
1,451,521	+		BT1164	0.23	-2.4
1,451,582	+		BT1164	0.26	-1.6
1,451,582	+		BT1164	0.26	-2.9
1,451,611	+		BT1164	0.27	-1.1
1,451,614	+		BT1164	0.27	+0.9
1,451,738	-		BT1164	0.33	-3.4
1,451,761	+		BT1164	0.34	-2.1
1,451,762	-		BT1164	0.34	-1.9
1,451,783	-		BT1164	0.35	-0.1
1,451,801	+		BT1164	0.36	-1.1
1,451,861	+		BT1164	0.38	-1.4
1,452,045	-		BT1164	0.47	-0.1
1,452,046	+		BT1164	0.47	-1.7
1,452,047	-		BT1164	0.47	-0.9
1,452,057	+		BT1164	0.47	-2.1
1,452,103	-		BT1164	0.49	-0.1
1,452,113	+		BT1164	0.50	+0.9
1,452,205	+		BT1164	0.54	-2.9
1,452,239	+		BT1164	0.55	-1.6
1,452,259	-		BT1164	0.56	-1.8
1,452,291	+		BT1164	0.58	-1.7
1,452,292	-		BT1164	0.58	-2.1
1,452,321	+		BT1164	0.59	-2.7
1,452,635	-		BT1164	0.73	-3.9
1,452,645	+		BT1164	0.74	-1.1
1,452,652	+		BT1164	0.74	-0.1
1,452,655	+		BT1164	0.74	-1.1
1,452,656	-		BT1164	0.74	-1.7
1,452,701	-		BT1164	0.76	-0.1
1,452,836	+		BT1164	0.82	+1.5
1,452,864	+		BT1164	0.83	+0.2
1,452,887	-		BT1164	0.84	-0.7
1,452,922	+		BT1164	0.86	-1.1
1,452,962	-		BT1164	0.88	-0.6
1,453,035	+				-1.1
1,453,059	-				-0.1
1,453,115	+				-1.4
1,453,117	+				-1.3
1,453,135	-				+1.5
1,453,156	-				-2.3
1,453,174	-				-2.4
1,453,307	-				-0.1
1,453,323	+				-1.1
1,453,326	-				-1.1
1,453,390	+				-2.1
1,453,524	-		BT1165	0.14	-0.1
1,453,598	+		BT1165	0.19	-0.1
1,453,598	+		BT1165	0.19	-1.9
1,453,605	-		BT1165	0.20	-0.1
1,453,636	+		BT1165	0.22	-0.1
1,453,636	+		BT1165	0.22	-0.1
1,453,639	+		BT1165	0.22	-2.1
1,453,645	+		BT1165	0.22	-2.1
1,453,709	+		BT1165	0.27	-0.1
1,453,714	+		BT1165	0.27	-1.1
1,453,715	-		BT1165	0.28	+1.9
1,453,776	-		BT1165	0.32	+0.5
1,453,778	-		BT1165	0.32	-1.5
1,453,863	+		BT1165	0.38	-1.1
1,453,958	+		BT1165	0.45	-0.9
1,454,145	-		BT1165	0.59	-1.4
1,454,147	+		BT1165	0.59	-0.5
1,454,147	+		BT1165	0.59	-1.1
1,454,148	-		BT1165	0.59	-2.4
1,454,154	-		BT1165	0.60	-1.1
1,454,192	+		BT1165	0.62	-0.1