Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3768

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,888,138	+				-0.5
4,888,231	+		BT3767	0.35	-2.5
4,888,232	-		BT3767	0.36	+0.5
4,888,261	+		BT3767	0.38	+1.5
4,888,269	-		BT3767	0.39	-1.5
4,888,306	-		BT3767	0.42	-0.8
4,888,311	+		BT3767	0.42	+0.5
4,888,336	-		BT3767	0.45	-0.9
4,888,339	+		BT3767	0.45	-1.5
4,888,340	-		BT3767	0.45	+0.0
4,888,344	+		BT3767	0.45	-1.4
4,888,345	-		BT3767	0.45	-2.6
4,888,345	-		BT3767	0.45	-1.1
4,888,397	-		BT3767	0.50	+2.0
4,888,427	+		BT3767	0.52	-0.5
4,888,429	+		BT3767	0.53	-0.1
4,888,429	+		BT3767	0.53	-1.3
4,888,431	+		BT3767	0.53	-2.7
4,888,431	+		BT3767	0.53	-1.1
4,888,459	+		BT3767	0.55	-0.5
4,888,517	-		BT3767	0.60	-2.6
4,888,563	-		BT3767	0.64	-1.7
4,888,563	-		BT3767	0.64	-0.8
4,888,564	+		BT3767	0.64	-2.4
4,888,638	-		BT3767	0.71	-0.5
4,888,643	-		BT3767	0.71	-0.3
4,888,643	-		BT3767	0.71	+0.5
4,888,643	-		BT3767	0.71	-1.4
4,888,674	+		BT3767	0.74	-1.5
4,888,679	+		BT3767	0.74	-0.9
4,888,691	+		BT3767	0.75	-0.9
4,888,692	-		BT3767	0.75	-0.9
4,888,692	-		BT3767	0.75	-0.5
4,888,721	+		BT3767	0.78	-0.9
4,888,721	+		BT3767	0.78	-1.5
4,888,723	+		BT3767	0.78	-2.0
4,888,724	-		BT3767	0.78	-0.5
4,888,724	-		BT3767	0.78	-1.5
4,888,953	+				+0.5
4,888,954	-				-2.1
4,888,956	+				+0.1
4,888,957	-				-1.9
4,888,986	-				+1.5
4,889,002	-				-1.7
4,889,003	+				-1.1
4,889,129	-				-0.9
4,889,316	-		BT3768	0.22	+2.0
4,889,316	-		BT3768	0.22	-0.9
4,889,317	+		BT3768	0.22	-0.5
4,889,320	+		BT3768	0.23	-1.2
4,889,321	-		BT3768	0.23	+0.1
4,889,354	-		BT3768	0.26	-1.1
4,889,418	-		BT3768	0.33	+0.5
4,889,418	-		BT3768	0.33	+0.9
4,889,454	-		BT3768	0.37	-1.6
4,889,539	+		BT3768	0.47	-1.0
4,889,539	+		BT3768	0.47	-1.9
4,889,598	+		BT3768	0.53	-1.9
4,889,598	+		BT3768	0.53	+0.5
4,889,612	+		BT3768	0.55	-0.9
4,889,628	+		BT3768	0.57	+1.6
4,889,628	+		BT3768	0.57	+0.5
4,889,629	-		BT3768	0.57	-0.5
4,889,668	+		BT3768	0.61	-0.9
4,889,669	-		BT3768	0.61	-0.5
4,889,719	-		BT3768	0.67	+0.5
4,889,719	-		BT3768	0.67	+0.5
4,889,723	-		BT3768	0.67	-1.5
4,889,786	+		BT3768	0.74	-1.1
4,889,817	-		BT3768	0.78	-0.5
4,889,819	-		BT3768	0.78	+1.5
4,889,977	+				+0.5
4,889,978	-				-0.3
4,890,027	-				-0.5
4,890,082	+				+0.0
4,890,083	-				+1.5
4,890,085	-				-1.5
4,890,167	-				-0.5
4,890,270	-		BT3769	0.30	+0.5
4,890,282	+		BT3769	0.33	+2.0
4,890,314	-		BT3769	0.40	-1.5
4,890,329	+		BT3769	0.44	-0.5
4,890,329	+		BT3769	0.44	-3.0
4,890,330	-		BT3769	0.44	-1.2
4,890,378	-		BT3769	0.55	+0.1
4,890,399	-		BT3769	0.60	-1.5
4,890,451	-		BT3769	0.72	-1.1
4,890,473	+		BT3769	0.77	-1.4
4,890,494	+		BT3769	0.82	+0.5
4,890,499	-		BT3769	0.83	-0.1
4,890,570	+				-0.5
4,890,582	+				+1.5
4,890,582	+				+0.5
4,890,617	+				+1.0
4,890,626	-				-0.7
4,890,626	-				+2.0
4,890,626	-				-1.1
4,890,629	-				-3.0
4,890,629	-				+0.5
4,890,736	-				-1.1
4,890,818	-				-0.7