Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2975

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,752,837	+		BT2972	0.66	-1.1
3,752,866	+		BT2972	0.69	+0.5
3,752,867	-		BT2972	0.69	-0.5
3,752,867	-		BT2972	0.69	-0.2
3,752,894	-		BT2972	0.73	-0.5
3,752,964	+		BT2972	0.82	-0.7
3,752,965	-		BT2972	0.82	-0.4
3,753,032	+				-2.0
3,753,032	+				-1.2
3,753,047	+				-3.0
3,753,048	-				+0.5
3,753,052	+				-2.3
3,753,065	+				+0.5
3,753,066	-				-1.4
3,753,075	-				+0.5
3,753,075	-				-1.1
3,753,079	-				+0.5
3,753,083	+				+0.5
3,753,084	-				-0.0
3,753,084	-				+0.5
3,753,087	+				+0.0
3,753,088	-				-1.5
3,753,109	-				-2.0
3,753,154	+				+0.5
3,753,157	+				+0.5
3,753,211	-				+0.5
3,753,254	+		BT2973	0.22	-0.7
3,753,255	-		BT2973	0.22	-1.5
3,753,358	+		BT2973	0.51	-1.3
3,753,358	+		BT2973	0.51	-0.1
3,753,481	-		BT2973	0.86	+0.5
3,753,526	+				-1.2
3,753,673	+		BT2974	0.59	-1.5
3,753,674	-		BT2974	0.60	+0.5
3,753,677	-		BT2974	0.61	-0.1
3,753,695	+		BT2974	0.69	-0.5
3,753,731	+		BT2974	0.86	-1.7
3,753,738	-		BT2974	0.89	-0.5
3,753,759	+				-0.5
3,753,828	+		BT2975	0.12	-0.1
3,753,828	+		BT2975	0.12	+1.5
3,753,829	-		BT2975	0.12	-0.3
3,753,829	-		BT2975	0.12	+0.2
3,753,829	-		BT2975	0.12	-1.3
3,753,829	-		BT2975	0.12	-2.3
3,753,834	+		BT2975	0.13	-1.9
3,753,835	-		BT2975	0.13	-0.3
3,753,853	+		BT2975	0.15	-1.5
3,753,861	-		BT2975	0.16	+0.5
3,753,885	-		BT2975	0.20	+0.0
3,753,910	+		BT2975	0.23	-0.1
3,753,911	-		BT2975	0.24	+2.0
3,753,911	-		BT2975	0.24	-0.5
3,753,911	-		BT2975	0.24	+2.0
3,753,940	+		BT2975	0.28	+0.5
3,753,940	+		BT2975	0.28	-1.3
3,753,955	+		BT2975	0.30	-1.3
3,754,008	+		BT2975	0.37	-0.9
3,754,042	-		BT2975	0.42	-1.5
3,754,061	+		BT2975	0.45	+0.5
3,754,062	-		BT2975	0.45	-1.1
3,754,062	-		BT2975	0.45	-0.5
3,754,084	+		BT2975	0.48	-1.3
3,754,085	-		BT2975	0.48	-0.5
3,754,086	+		BT2975	0.48	-0.6
3,754,087	-		BT2975	0.49	-0.5
3,754,088	+		BT2975	0.49	+0.5
3,754,089	-		BT2975	0.49	-1.1
3,754,089	-		BT2975	0.49	-0.9
3,754,182	+		BT2975	0.62	-1.7
3,754,183	-		BT2975	0.62	-0.4
3,754,290	+		BT2975	0.77	+0.5
3,754,292	+		BT2975	0.78	-1.3
3,754,293	-		BT2975	0.78	-0.9
3,754,327	+		BT2975	0.83	-1.4
3,754,342	+		BT2975	0.85	+0.5
3,754,343	-		BT2975	0.85	-1.3
3,754,362	+		BT2975	0.88	+0.6
3,754,362	+		BT2975	0.88	-4.1
3,754,432	+				-1.0
3,754,433	-				+0.5
3,754,463	+				-0.5
3,754,464	-				-2.1
3,754,470	-				+0.5
3,754,504	-				-1.4
3,754,531	-				-0.5
3,754,540	+				-0.5
3,754,552	+				-0.2
3,754,564	+				-0.5
3,754,574	+				-1.4
3,754,689	-				-0.8
3,754,710	+				-1.3
3,754,711	-				-1.7
3,754,733	-				+0.1
3,754,789	+				-0.9
3,754,792	-				-0.9
3,754,837	+				+0.5
3,754,875	+				-3.3
3,754,918	+				-2.3
3,754,970	+				+0.1
3,754,971	-				-1.1
3,754,998	-		BT2976	0.13	-1.1
3,755,019	+		BT2976	0.17	-2.3
3,755,020	-		BT2976	0.17	-1.7
3,755,027	+		BT2976	0.18	-0.7
3,755,086	+		BT2976	0.28	-0.3
3,755,106	+		BT2976	0.32	-0.6
3,755,106	+		BT2976	0.32	-0.4
3,755,106	+		BT2976	0.32	-0.5
3,755,107	-		BT2976	0.32	+0.0
3,755,107	-		BT2976	0.32	+0.5
3,755,157	+		BT2976	0.40	-0.9
3,755,252	+		BT2976	0.57	-1.3
3,755,287	-		BT2976	0.63	-2.0
3,755,345	+		BT2976	0.72	-1.1
3,755,405	-		BT2976	0.83	-0.9
3,755,407	-		BT2976	0.83	-1.5