Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2833

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,530,047	+		BT2831	0.89	-0.5
3,530,071	+				-0.5
3,530,071	+				+1.5
3,530,075	+				-0.5
3,531,064	+				-1.5
3,531,064	+				+1.1
3,531,087	+				-1.5
3,531,087	+				+0.5
3,531,087	+				-1.1
3,531,202	-		BT2833	0.18	-1.5
3,531,238	+		BT2833	0.21	-1.6
3,531,239	-		BT2833	0.21	-2.1
3,531,242	+		BT2833	0.22	-2.2
3,531,242	+		BT2833	0.22	-1.3
3,531,242	+		BT2833	0.22	-1.1
3,531,243	-		BT2833	0.22	+0.1
3,531,243	-		BT2833	0.22	-2.5
3,531,243	-		BT2833	0.22	-1.5
3,531,253	+		BT2833	0.23	-0.4
3,531,262	-		BT2833	0.24	-1.5
3,531,263	+		BT2833	0.24	-0.3
3,531,321	+		BT2833	0.29	-0.4
3,531,406	+		BT2833	0.37	-1.5
3,531,407	-		BT2833	0.37	-0.5
3,531,407	-		BT2833	0.37	-0.7
3,531,407	-		BT2833	0.37	-1.9
3,531,407	-		BT2833	0.37	-1.1
3,531,447	+		BT2833	0.41	-1.9
3,531,487	-		BT2833	0.44	-1.4
3,531,487	-		BT2833	0.44	-0.3
3,531,635	+		BT2833	0.58	-0.5
3,531,647	-		BT2833	0.59	-0.1
3,531,705	-				+2.1
3,531,705	-		BT2833	0.64	-0.5
3,531,705	-		BT2833	0.64	+0.5
3,531,846	-		BT2833	0.77	-1.3
3,531,883	-		BT2833	0.81	-0.5
3,531,883	-		BT2833	0.81	-2.3
3,532,075	-				-1.5
3,532,075	-				+0.5
3,532,077	-				-3.3
3,532,108	+				-1.0
3,532,109	-				-1.1
3,532,150	+				-1.9
3,532,150	+				+0.5
3,532,158	-				-0.5
3,532,164	+				-0.8
3,532,164	+				-0.9
3,532,165	-				-2.0
3,532,299	+				-2.1
3,532,337	+		BT2834	0.10	-2.1
3,532,337	+		BT2834	0.10	-1.2
3,532,350	-		BT2834	0.11	+0.5
3,532,393	+		BT2834	0.13	-0.5
3,532,393	+		BT2834	0.13	+1.1
3,532,394	-		BT2834	0.13	+1.0
3,532,394	-		BT2834	0.13	-2.0
3,532,412	+		BT2834	0.14	-0.5
3,532,537	-		BT2834	0.20	-1.1
3,532,537	-		BT2834	0.20	-1.8
3,532,596	+		BT2834	0.23	-0.1
3,532,597	-		BT2834	0.23	-1.5
3,532,623	-		BT2834	0.24	+1.5
3,532,700	+		BT2834	0.28	-1.1
3,532,701	-		BT2834	0.28	-1.9
3,532,705	+		BT2834	0.28	-1.5
3,532,872	+		BT2834	0.36	-1.4
3,532,914	+		BT2834	0.38	-1.3
3,532,914	+		BT2834	0.38	-1.5
3,533,068	+		BT2834	0.46	-1.6
3,533,068	+		BT2834	0.46	-2.1