Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2690

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,351,494	-				-1.1
3,351,539	+		BT2689	0.13	-0.1
3,351,540	-		BT2689	0.13	+0.5
3,351,541	+		BT2689	0.13	-0.5
3,351,564	+		BT2689	0.17	+0.5
3,351,564	+		BT2689	0.17	-0.7
3,351,566	+		BT2689	0.17	+0.5
3,351,567	-		BT2689	0.17	-0.5
3,351,567	-		BT2689	0.17	-2.3
3,351,572	+		BT2689	0.18	+0.1
3,351,601	+		BT2689	0.23	+2.5
3,351,673	+		BT2689	0.34	+0.5
3,351,694	+		BT2689	0.37	+0.5
3,351,750	+		BT2689	0.46	+0.5
3,351,750	+		BT2689	0.46	-0.5
3,351,836	+		BT2689	0.59	-0.9
3,351,883	-		BT2689	0.66	-2.7
3,351,883	-		BT2689	0.66	-1.1
3,351,961	+		BT2689	0.78	+0.5
3,351,962	-		BT2689	0.78	-1.3
3,352,006	+		BT2689	0.85	-1.1
3,352,125	+				+0.5
3,352,155	-				-0.5
3,352,220	+				-1.8
3,352,237	-				-0.5
3,352,250	-				-0.9
3,352,398	+				-0.1
3,352,411	+				-0.5
3,352,411	+				-0.5
3,352,412	-				-0.6
3,352,446	+				-1.1
3,352,478	+				-0.9
3,352,482	+				-0.1
3,352,482	+				+0.5
3,352,628	+		BT2690	0.13	-0.4
3,352,686	+		BT2690	0.17	-0.7
3,352,686	+		BT2690	0.17	-1.1
3,352,686	+		BT2690	0.17	-0.8
3,352,738	+		BT2690	0.20	-0.2
3,352,744	+		BT2690	0.20	+0.5
3,352,744	+		BT2690	0.20	-0.7
3,352,767	-		BT2690	0.22	-1.5
3,352,921	+		BT2690	0.32	-0.1
3,352,922	-		BT2690	0.32	-1.1
3,352,928	+		BT2690	0.33	-0.7
3,353,049	-		BT2690	0.41	+0.5
3,353,060	+		BT2690	0.42	-1.4
3,353,069	-		BT2690	0.42	+0.5
3,353,107	-		BT2690	0.45	-0.8
3,353,196	+		BT2690	0.51	-0.1
3,353,311	-		BT2690	0.58	-0.5
3,353,311	-		BT2690	0.58	-1.2
3,353,561	+		BT2690	0.75	-0.1
3,353,578	-		BT2690	0.76	+0.5
3,353,726	+		BT2690	0.86	-0.7
3,353,727	-		BT2690	0.86	-0.2
3,353,913	+				-1.5
3,353,913	+				-1.9
3,353,914	-				-0.7
3,353,936	+				-0.1
3,353,966	+				+0.5
3,353,967	-				-0.8
3,354,046	+		BT2691	0.18	+0.5
3,354,061	+		BT2691	0.20	-0.6
3,354,167	+		BT2691	0.37	-1.5
3,354,331	+		BT2691	0.63	-1.5
3,354,526	+				-1.5
3,354,526	+				-0.9
3,354,527	-				-0.3
3,354,543	-				-1.6
3,354,557	+				-1.1
3,354,566	-				+0.5
3,354,578	+				-1.3
3,354,599	+				-1.2
3,354,599	+				-0.6
3,354,600	-				+0.5
3,354,613	+				+1.1
3,354,614	-				-1.3
3,354,645	+				-0.1
3,354,646	-				+0.5
3,354,646	-				-1.5
3,354,787	+		BT2692	0.16	-0.9
3,354,798	+		BT2692	0.17	-1.1
3,354,798	+		BT2692	0.17	-0.5
3,354,802	+		BT2692	0.17	+0.6
3,354,915	+		BT2692	0.26	-0.5