Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2551

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,182,736	-				-1.5
3,182,861	-		BT2550	0.15	+0.5
3,182,905	-		BT2550	0.20	-2.1
3,182,924	+		BT2550	0.23	+0.5
3,182,924	+		BT2550	0.23	-1.3
3,182,925	-		BT2550	0.23	+0.5
3,182,928	+		BT2550	0.23	-1.1
3,182,929	-		BT2550	0.23	+0.5
3,182,929	-		BT2550	0.23	-0.5
3,182,987	-		BT2550	0.30	-1.9
3,183,083	+		BT2550	0.42	-0.1
3,183,161	+		BT2550	0.52	-0.8
3,183,242	+		BT2550	0.62	+0.5
3,183,262	+		BT2550	0.64	+0.5
3,183,356	+		BT2550	0.76	-1.7
3,183,358	+		BT2550	0.76	-0.2
3,183,358	+		BT2550	0.76	-2.1
3,183,359	-		BT2550	0.76	-1.5
3,183,359	-		BT2550	0.76	-0.9
3,183,363	-		BT2550	0.77	-1.2
3,183,608	+				-1.0
3,183,611	-				-1.5
3,183,631	-				-1.1
3,183,652	+				-1.1
3,183,653	-				+0.5
3,183,820	+				-1.1
3,183,820	+				-1.5
3,183,830	+		BT2551	0.11	+1.5
3,183,905	+		BT2551	0.19	-2.5
3,183,932	+		BT2551	0.22	-1.9
3,183,932	+		BT2551	0.22	-1.1
3,184,017	+		BT2551	0.31	+1.5
3,184,017	+		BT2551	0.31	-0.6
3,184,139	-		BT2551	0.43	-1.1
3,184,211	+		BT2551	0.51	+1.5
3,184,266	+		BT2551	0.57	-0.5
3,184,360	-		BT2551	0.67	+0.5
3,184,383	+		BT2551	0.69	-0.1
3,184,383	+		BT2551	0.69	-1.1
3,184,471	+		BT2551	0.79	-1.5
3,184,473	+		BT2551	0.79	-1.5
3,184,493	+		BT2551	0.81	-1.1
3,184,493	+		BT2551	0.81	-1.3
3,184,601	+				+0.5
3,184,602	-				-2.1
3,184,676	+				-1.1
3,184,747	-				-2.3
3,184,795	+				+0.5
3,184,796	-				-1.1
3,184,981	+		BT2552	0.26	-0.5
3,185,116	+		BT2552	0.39	+0.5
3,185,260	+		BT2552	0.52	-0.5
3,185,299	+		BT2552	0.56	-1.9
3,185,407	-		BT2552	0.66	-1.4
3,185,417	-		BT2552	0.67	-1.9
3,185,417	-		BT2552	0.67	-1.1
3,185,531	+		BT2552	0.78	-1.3
3,185,531	+		BT2552	0.78	+1.5
3,185,531	+		BT2552	0.78	-0.5
3,185,532	-		BT2552	0.78	-0.5
3,185,533	+		BT2552	0.78	-1.1
3,185,533	+		BT2552	0.78	+0.5
3,185,534	-		BT2552	0.78	+0.5
3,185,584	-		BT2552	0.83	-0.2
3,185,609	-		BT2552	0.85	-3.6
3,185,624	+		BT2552	0.87	-1.1
3,185,627	-		BT2552	0.87	-1.9
3,185,670	+				-2.1
3,185,670	+				-2.0
3,185,670	+				-1.7
3,185,671	-				-0.5