Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4235

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
5,574,378	-		BT4234	0.21	+1.0
5,574,655	-		BT4234	0.69	-1.0
5,574,655	-		BT4234	0.69	-2.3
5,574,656	+		BT4234	0.70	+0.0
5,574,665	+		BT4234	0.71	-2.4
5,574,772	+				-0.6
5,574,772	+				+0.1
5,574,773	-				-2.0
5,574,773	-				-1.6
5,574,864	+				+0.0
5,574,872	-				-2.3
5,574,879	+				-0.2
5,574,880	-				-2.8
5,574,930	+				+0.0
5,574,946	-				-0.6
5,575,008	+				+0.3
5,575,042	-				+0.0
5,575,050	-				-3.6
5,575,054	+				-3.2
5,575,055	-				+0.0
5,575,164	+				-1.7
5,575,164	+				-1.0
5,575,198	+				-1.0
5,575,199	-				-2.3
5,575,237	-				-0.6
5,575,244	-				-1.9
5,575,244	-				-2.3
5,575,320	+				-1.0
5,575,321	-				-2.2
5,575,323	+				-1.0
5,575,323	+				-0.6
5,575,338	+				-0.8
5,575,386	+				-2.0
5,575,445	+		BT4235	0.19	-1.6
5,575,445	+		BT4235	0.19	-2.7
5,575,446	-		BT4235	0.19	+1.0
5,575,447	+		BT4235	0.19	-3.0
5,575,448	-		BT4235	0.19	+0.4
5,575,452	+		BT4235	0.20	+0.0
5,575,452	+		BT4235	0.20	-3.2
5,575,454	+		BT4235	0.20	-1.6
5,575,477	-		BT4235	0.24	-1.0
5,575,551	+		BT4235	0.35	-1.6
5,575,551	+		BT4235	0.35	-0.9
5,575,555	-		BT4235	0.36	-1.0
5,575,591	+		BT4235	0.42	+0.0
5,575,664	+		BT4235	0.53	+2.0
5,575,664	+		BT4235	0.53	+0.0
5,575,698	+		BT4235	0.58	-1.0
5,575,702	-		BT4235	0.59	-2.0
5,575,722	-		BT4235	0.62	-3.1
5,575,726	+		BT4235	0.63	-3.0
5,575,726	+		BT4235	0.63	-0.7
5,575,727	-		BT4235	0.63	-0.3
5,575,730	+		BT4235	0.63	-1.3
5,575,730	+		BT4235	0.63	-0.2
5,575,731	-		BT4235	0.64	-1.0
5,575,731	-		BT4235	0.64	-2.3
5,575,734	+		BT4235	0.64	+0.5
5,575,735	-		BT4235	0.64	-1.0
5,575,737	+		BT4235	0.64	-2.4
5,575,737	+		BT4235	0.64	-1.2
5,575,738	-		BT4235	0.65	-1.0
5,575,742	-		BT4235	0.65	-2.0
5,575,742	-		BT4235	0.65	+0.4
5,575,790	+		BT4235	0.73	-2.5
5,575,791	-		BT4235	0.73	-1.0
5,575,791	-		BT4235	0.73	+1.0
5,575,798	-		BT4235	0.74	-2.6
5,575,798	-		BT4235	0.74	+0.0
5,575,835	-		BT4235	0.80	-1.0
5,575,863	+		BT4235	0.84	+0.0
5,575,875	+		BT4235	0.86	-3.4
5,575,899	+				-0.5
5,575,903	+				-2.3
5,575,918	-				+0.0
5,575,920	+				-3.0
5,575,921	-				-0.4
5,575,938	+				-2.5
5,575,989	+				-1.0
5,576,005	-				-2.8
5,576,007	-				-1.6
5,576,013	+				+0.0
5,576,018	-				-2.0
5,576,084	+				-1.4
5,576,084	+				-1.8
5,576,086	+				-1.0
5,576,087	-				+1.0
5,576,109	-				+0.6
5,576,162	-				-1.1
5,576,221	-				+1.2
5,576,221	-				+0.0
5,576,240	+				-1.0
5,576,261	+				-1.0
5,576,266	+				+1.3
5,576,318	+				+0.0
5,576,318	+				+0.0
5,576,318	+				+0.0
5,576,319	-				-2.6
5,576,319	-				-1.0
5,576,325	+				-1.6
5,576,325	+				-1.6
5,576,326	-				-0.4
5,576,330	-				+2.2
5,576,344	-				+0.8
5,576,387	+				+0.6
5,576,388	-				+0.0
5,576,416	+				-1.0
5,576,416	+				-1.6
5,576,417	-				-0.1
5,576,417	-				-2.2
5,576,485	+				-2.2
5,576,561	+				-2.0
5,576,690	+		BT4236	0.10	-0.2
5,576,691	-		BT4236	0.10	-2.5
5,576,767	+		BT4236	0.12	+0.0
5,576,768	-		BT4236	0.12	-0.2
5,576,804	-		BT4236	0.13	-1.6
5,576,866	-		BT4236	0.14	-3.2
5,576,870	+		BT4236	0.15	+0.9
5,576,871	-		BT4236	0.15	-1.0
5,576,909	+		BT4236	0.15	+0.8
5,576,909	+		BT4236	0.15	-0.7
5,576,909	+		BT4236	0.15	+0.0
5,576,910	-		BT4236	0.15	-0.1
5,576,910	-		BT4236	0.15	-2.8
5,576,946	-		BT4236	0.16	+0.6
5,576,949	+		BT4236	0.16	-1.0
5,576,950	-		BT4236	0.16	+0.0
5,576,950	-		BT4236	0.16	-1.7