Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3925
Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) |
---|---|---|---|---|---|
remove | |||||
5,098,443 | - | BT3924 | 0.67 | -1.6 | |
5,099,339 | + | -0.6 | |||
5,099,445 | + | BT3925 | 0.18 | -2.6 | |
5,099,495 | + | BT3925 | 0.29 | -0.5 | |
5,099,495 | + | BT3925 | 0.29 | -2.3 | |
5,099,587 | + | BT3925 | 0.48 | -0.8 | |
5,099,619 | + | BT3925 | 0.55 | -2.6 | |
5,099,637 | + | BT3925 | 0.59 | -2.9 | |
5,099,709 | + | BT3925 | 0.75 | -4.4 | |
5,099,771 | + | BT3925 | 0.88 | -1.6 | |
5,099,806 | + | -2.0 | |||
5,100,580 | + | BT3926 | 0.84 | -1.8 | |
5,100,726 | + | -1.0 | |||
5,100,727 | - | +1.6 | |||
5,100,734 | + | +0.4 | |||
5,100,735 | - | -3.6 | |||
5,100,756 | - | -3.6 | |||
5,100,795 | + | -2.6 |
Or see this region's nucleotide sequence