Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3583

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
4,636,107	-		BT3581	0.51	-1.4
4,636,122	+		BT3581	0.52	-1.0
4,636,176	+		BT3581	0.56	-2.6
4,636,219	+		BT3581	0.60	-2.6
4,636,290	+		BT3581	0.65	-0.6
4,636,294	+		BT3581	0.65	-3.9
4,636,295	-		BT3581	0.65	-1.8
4,636,295	-		BT3581	0.65	-0.6
4,636,356	+		BT3581	0.70	-1.8
4,636,378	+		BT3581	0.71	-0.0
4,636,379	-		BT3581	0.71	-2.4
4,636,502	-		BT3581	0.81	+0.6
4,636,507	+		BT3581	0.81	-0.0
4,636,554	+		BT3581	0.84	+0.3
4,636,558	+		BT3581	0.85	-2.7
4,636,603	+		BT3581	0.88	-0.0
4,636,603	+		BT3581	0.88	-2.2
4,636,668	+				-2.2
4,636,694	-				+1.3
4,636,762	+				-3.2
4,636,763	-				-1.0
4,636,785	+				-2.4
4,636,794	-				-2.9
4,636,802	-				-1.6
4,636,803	+				-2.4
4,636,852	-				-0.5
4,636,895	-		BT3582	0.19	+1.6
4,636,918	-		BT3582	0.28	-3.0
4,636,944	+		BT3582	0.39	-3.7
4,636,981	+		BT3582	0.55	-1.6
4,636,981	+		BT3582	0.55	-1.0
4,636,981	+		BT3582	0.55	+1.0
4,636,981	+		BT3582	0.55	-1.8
4,636,983	+		BT3582	0.55	-1.5
4,636,984	-		BT3582	0.56	-0.7
4,636,999	+		BT3582	0.62	-2.3
4,637,003	-		BT3582	0.64	-0.4
4,637,003	-		BT3582	0.64	-1.0
4,637,030	+		BT3582	0.75	-1.0
4,637,081	-				-3.0
4,637,106	+				-1.6
4,637,106	+				+1.0
4,637,106	+				-2.6
4,637,137	+				-1.8
4,637,180	+				+1.0
4,637,181	-				+0.6
4,637,205	-				-0.0
4,637,233	+		BT3583	0.11	-1.0
4,637,234	-		BT3583	0.11	-3.0
4,637,315	-		BT3583	0.17	-0.0
4,637,402	+		BT3583	0.23	+0.2
4,637,403	-		BT3583	0.23	-2.5
4,637,408	-		BT3583	0.24	-1.0
4,637,408	-		BT3583	0.24	-0.0
4,637,425	+		BT3583	0.25	-2.0
4,637,466	+		BT3583	0.28	-0.0
4,637,467	-		BT3583	0.28	-0.0
4,637,470	-		BT3583	0.28	+0.3
4,637,470	-		BT3583	0.28	-0.4
4,637,474	-		BT3583	0.29	-1.0
4,637,491	+		BT3583	0.30	-2.8
4,637,494	+		BT3583	0.30	-2.2
4,637,524	+		BT3583	0.33	+1.6
4,637,537	-		BT3583	0.33	-0.0
4,637,581	-		BT3583	0.37	-0.5
4,637,586	+		BT3583	0.37	-0.9
4,637,603	-		BT3583	0.38	-2.4
4,637,607	+		BT3583	0.39	+0.5
4,637,610	-		BT3583	0.39	-0.0
4,637,883	+		BT3583	0.60	-1.4
4,637,884	-		BT3583	0.60	-0.3
4,637,896	-		BT3583	0.61	-2.0
4,637,899	+		BT3583	0.61	-0.0
4,637,949	+		BT3583	0.65	-0.6
4,637,949	+		BT3583	0.65	-0.6
4,637,949	+		BT3583	0.65	+1.0
4,637,949	+		BT3583	0.65	-0.8
4,637,950	-		BT3583	0.65	-0.0
4,637,950	-		BT3583	0.65	+1.0
4,637,952	-		BT3583	0.65	-0.0
4,637,952	-		BT3583	0.65	-0.0
4,637,952	-		BT3583	0.65	-0.4
4,637,952	-		BT3583	0.65	-1.6
4,637,953	+		BT3583	0.65	+1.0
4,637,954	-		BT3583	0.65	+0.6
4,637,970	-		BT3583	0.66	+0.4
4,637,999	+		BT3583	0.68	-2.4
4,638,000	-		BT3583	0.68	-0.3
4,638,000	-		BT3583	0.68	-3.9
4,638,069	-		BT3583	0.74	-3.4
4,638,080	-		BT3583	0.74	-0.5
4,638,134	+		BT3583	0.79	-0.7
4,638,135	-		BT3583	0.79	-0.8
4,638,166	-		BT3583	0.81	-1.0
4,638,225	+		BT3583	0.85	-2.1
4,638,225	+		BT3583	0.85	+1.6
4,638,225	+		BT3583	0.85	-1.0
4,638,225	+		BT3583	0.85	-1.6
4,638,225	+				-0.6
4,638,245	-		BT3583	0.87	+1.6
4,638,352	+				+0.3
4,638,352	+				-1.9
4,638,354	+				+0.3
4,638,428	+				-0.8
4,638,430	+				-1.0
4,638,431	-				-0.0
4,638,431	-				+0.2
4,638,432	+				-1.8
4,638,433	-				-0.0
4,638,433	-				-1.6
4,638,434	+				+0.0
4,638,434	+				-0.6
4,638,513	+		BT3584	0.12	-3.3
4,638,513	+		BT3584	0.12	+1.0
4,638,514	-		BT3584	0.13	-1.0
4,638,596	+		BT3584	0.24	-1.0
4,638,607	+		BT3584	0.25	-0.7
4,638,617	+		BT3584	0.26	-2.0
4,638,638	+		BT3584	0.29	-2.9
4,638,679	+		BT3584	0.35	-0.8
4,638,716	-		BT3584	0.40	-2.5
4,638,774	+		BT3584	0.48	-1.4
4,638,777	-		BT3584	0.48	-2.7
4,638,864	-		BT3584	0.60	-0.1
4,638,873	-		BT3584	0.61	-0.3
4,638,967	-		BT3584	0.74	-1.4
4,638,972	-		BT3584	0.74	-2.8
4,639,013	+		BT3584	0.80	-0.4
4,639,014	-		BT3584	0.80	+0.1
4,639,023	+		BT3584	0.81	-2.0
4,639,032	+		BT3584	0.82	+0.0
4,639,080	+		BT3584	0.89	+1.3
4,639,095	-				-1.0
4,639,095	-				-2.8
4,639,095	-				-0.6
4,639,113	+				-2.8
4,639,164	-				+0.0
4,639,247	+				+0.2
4,639,278	+				-0.3
4,639,287	+				-0.3
4,639,288	-				-1.4
4,639,289	+				-2.4
4,639,293	-				-0.7
4,639,297	-				-1.3
4,639,336	-				-0.0
4,639,366	+				-0.6
4,639,366	+				-0.0
4,639,367	-				-0.1