Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3064

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
3,884,972	+				+0.2
3,884,977	+				-0.0
3,884,977	+				-0.4
3,885,096	+				-1.1
3,885,127	+				+1.6
3,885,139	+				-2.2
3,885,158	+				-1.0
3,885,250	+		BT3063	0.20	-0.0
3,885,250	+		BT3063	0.20	-1.0
3,885,251	-		BT3063	0.20	-2.0
3,885,253	-		BT3063	0.21	-1.2
3,885,261	-		BT3063	0.24	-1.3
3,885,310	+		BT3063	0.44	+2.2
3,885,319	-		BT3063	0.47	+0.4
3,885,352	-		BT3063	0.60	-1.0
3,885,366	+		BT3063	0.65	-1.0
3,885,367	-		BT3063	0.66	+0.7
3,885,373	-		BT3063	0.68	-2.8
3,885,373	-		BT3063	0.68	-0.0
3,885,386	+		BT3063	0.73	-0.0
3,885,387	-		BT3063	0.74	-0.8
3,885,419	-		BT3063	0.86	+1.0
3,885,452	-				-2.3
3,885,478	-				+2.0
3,885,499	+				-0.6
3,885,499	+				-0.0
3,885,499	+				+0.4
3,885,500	-				-2.5
3,885,503	+				-0.3
3,885,503	+				-2.9
3,885,503	+				-2.1
3,885,503	+				+0.2
3,885,503	+				-0.0
3,885,503	+				-1.0
3,885,504	-				-0.0
3,885,504	-				-0.5
3,885,505	+				-0.9
3,885,506	-				-1.4
3,885,506	-				-1.2
3,885,509	+				-0.3
3,885,510	-				-2.0
3,885,521	-				-1.3
3,885,539	+				-1.0
3,885,557	+				-0.7
3,885,585	-				-1.3
3,885,585	-				+1.0
3,885,595	+				-1.0
3,885,604	+				-1.3
3,885,604	+				-1.6
3,885,606	+				+0.3
3,885,607	-				+0.3
3,885,607	-				-3.0
3,885,611	+				+1.6
3,885,657	-				-1.3
3,885,713	-				-1.0
3,885,736	-				-0.6
3,885,736	-				-2.7
3,885,762	+				+1.0
3,885,776	-				-2.0
3,885,816	-				-1.1
3,885,939	+				+2.0
3,885,939	+				-0.0
3,885,939	+				-2.4
3,885,939	+				-0.5
3,886,038	+		BT3064	0.42	-0.0
3,886,040	+		BT3064	0.43	-1.4
3,886,040	+		BT3064	0.43	-2.2
3,886,041	-		BT3064	0.43	-3.1
3,886,041	-		BT3064	0.43	-3.0
3,886,113	-		BT3064	0.76	-0.0
3,886,127	-		BT3064	0.82	-1.0
3,886,220	-				-0.0
3,886,220	-				-1.0
3,886,220	-				-2.0
3,886,227	-				+0.1
3,886,265	+				-1.2
3,886,299	+				-0.0
3,886,300	-				-1.0
3,886,326	-				-3.6
3,886,338	-				-2.4
3,886,341	-				-0.6
3,886,341	-				-2.6
3,886,341	-				-0.8
3,886,352	+				-2.1
3,886,353	-				-0.4
3,886,367	+				-0.2
3,886,368	-				-1.0
3,886,374	+				-0.0
3,886,465	+				+0.6
3,886,466	-				-3.3
3,886,532	-				+0.6
3,886,591	-				-1.0
3,886,608	+				-0.0
3,886,609	-				-1.0
3,886,609	-				+0.4
3,886,609	-				-1.4
3,886,609	-				+1.0
3,886,609	-				-1.9
3,886,611	+				-2.0
3,886,662	+				-2.2
3,886,662	+				-1.3
3,886,663	-				+1.0
3,886,697	+				+1.6
3,886,697	+				-2.7
3,886,697	+				-0.5
3,886,697	+				-1.6
3,886,698	-				-1.1
3,886,702	+				-1.6
3,886,741	-				-1.0
3,886,741	-				-1.0
3,886,741	-				+0.1
3,886,741	-				-1.0
3,886,741	-				-3.3
3,886,787	+				-1.0
3,886,787	+				-0.2
3,886,788	-				-0.2
3,886,788	-				-2.3
3,886,792	+		BT3065	0.10	-1.0
3,886,793	-		BT3065	0.10	-2.7
3,886,824	-		BT3065	0.12	+0.6
3,886,866	+		BT3065	0.15	-2.0
3,886,957	+		BT3065	0.21	-1.0
3,887,011	+		BT3065	0.25	-1.0
3,887,019	-		BT3065	0.25	-2.7
3,887,038	-		BT3065	0.27	-0.4
3,887,038	-		BT3065	0.27	-1.7
3,887,074	+		BT3065	0.29	-3.0
3,887,080	+		BT3065	0.29	-1.0
3,887,102	+		BT3065	0.31	-1.8
3,887,103	-		BT3065	0.31	-0.3