Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2619

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
3,258,933	+		BT2618	0.28	+0.5
3,259,145	+		BT2618	0.45	+1.2
3,259,184	-		BT2618	0.48	+0.2
3,259,184	-		BT2618	0.48	-2.1
3,259,357	+		BT2618	0.62	-0.1
3,259,357	+		BT2618	0.62	-0.1
3,259,357	+		BT2618	0.62	+0.2
3,259,358	-		BT2618	0.62	+0.5
3,259,434	+		BT2618	0.68	+1.5
3,259,467	+		BT2618	0.70	-0.1
3,259,615	+		BT2618	0.82	-2.4
3,259,615	+		BT2618	0.82	-2.8
3,259,636	-		BT2618	0.83	-0.1
3,259,669	+		BT2618	0.86	-0.6
3,259,669	+		BT2618	0.86	-2.6
3,259,754	-				-1.8
3,259,829	+				-1.1
3,259,832	-				-3.9
3,259,832	-				-1.6
3,259,921	+				-0.6
3,259,921	+				-0.1
3,259,922	-				-0.9
3,259,922	-				-1.1
3,259,925	+				-1.1
3,259,926	-				-2.1
3,259,926	-				-2.4
3,259,968	+				-0.1
3,259,973	+				-2.4
3,260,252	+		BT2619	0.17	-0.7
3,260,319	+		BT2619	0.20	-2.4
3,260,425	+		BT2619	0.24	-0.8
3,260,470	+		BT2619	0.26	-2.3
3,260,470	+		BT2619	0.26	-3.2
3,260,471	-		BT2619	0.26	-2.0
3,260,565	+		BT2619	0.30	-2.9
3,260,572	+		BT2619	0.30	-2.4
3,260,572	+		BT2619	0.30	-2.1
3,260,572	+		BT2619	0.30	-0.5
3,260,590	-		BT2619	0.31	-2.3
3,260,609	+		BT2619	0.32	-3.4
3,260,643	-		BT2619	0.33	-2.6
3,260,778	+		BT2619	0.39	-0.4
3,260,819	+		BT2619	0.41	-0.4
3,260,834	+		BT2619	0.41	-0.1
3,260,834	+		BT2619	0.41	-0.4
3,260,932	-		BT2619	0.45	+0.5
3,261,019	+		BT2619	0.49	-0.3
3,261,019	+		BT2619	0.49	+0.5
3,261,020	-		BT2619	0.49	+0.3
3,261,134	+		BT2619	0.54	-0.1
3,261,134	+		BT2619	0.54	-1.1
3,261,134	+		BT2619	0.54	-2.5
3,261,134	+		BT2619	0.54	-1.2
3,261,134	+		BT2619	0.54	-1.5
3,261,135	-		BT2619	0.54	+1.7
3,261,136	+		BT2619	0.54	+0.8
3,261,180	-		BT2619	0.56	-0.1
3,261,258	-		BT2619	0.59	-5.0
3,261,269	+		BT2619	0.60	-1.2
3,261,269	+		BT2619	0.60	+0.9
3,261,269	+		BT2619	0.60	-1.6
3,261,269	+		BT2619	0.60	-0.1
3,261,361	-		BT2619	0.64	-1.9
3,261,362	+		BT2619	0.64	+1.9
3,261,368	+		BT2619	0.64	+0.4
3,261,368	+		BT2619	0.64	-0.3
3,261,369	-		BT2619	0.64	-1.1
3,261,411	-		BT2619	0.66	-1.5
3,261,411	-		BT2619	0.66	-0.8
3,261,457	+		BT2619	0.68	-2.0
3,261,507	-		BT2619	0.70	-1.6
3,261,512	-		BT2619	0.70	-2.1
3,261,525	+		BT2619	0.70	+0.1
3,261,534	-		BT2619	0.71	-1.1
3,261,624	+		BT2619	0.75	+0.7
3,261,624	+		BT2619	0.75	-1.9
3,261,697	+		BT2619	0.78	-1.1
3,261,857	+		BT2619	0.84	-1.1
3,261,861	+		BT2619	0.85	-0.1
3,261,861	+		BT2619	0.85	-1.6
3,261,862	-		BT2619	0.85	-0.1
3,261,915	+		BT2619	0.87	+0.9
3,261,946	+		BT2619	0.88	-1.0
3,261,947	-		BT2619	0.88	-0.1
3,261,997	+				-0.8
3,262,001	+				-0.9
3,262,042	+				+1.7
3,262,043	-				-0.1
3,262,159	+				-2.9
3,262,164	-				-1.6
3,262,167	-				-0.6
3,262,193	+				-0.1
3,262,194	-				-0.5
3,262,194	-				-1.2
3,262,194	-				+0.7
3,262,195	+				-1.1
3,262,196	-				-0.6
3,262,196	-				-2.9
3,262,202	+				-1.4
3,262,304	+				-0.8
3,262,305	-				-1.1
3,262,340	-				-0.3
3,262,358	-				-2.1
3,262,367	+				-1.1
3,262,370	+				-1.1
3,262,371	-				-2.1
3,262,388	+				-0.6
3,262,389	-				-0.1
3,262,392	-				-1.6
3,262,392	-				-0.1
3,262,392	-				+1.5
3,262,412	+				-1.9
3,262,415	-				-1.3
3,262,441	+				+0.5
3,262,441	+				-0.1
3,262,447	+				-0.1
3,262,448	-				-1.4
3,262,448	-				-2.1
3,262,450	+				-1.6
3,262,451	-				-0.4
3,262,456	-				-0.5
3,262,483	-				-1.6
3,262,493	+				-2.6
3,262,494	-				-1.3
3,262,498	-				+0.9
3,262,500	+				+0.7
3,262,501	-				-1.1
3,262,536	-				-0.2
3,262,552	+				-3.0
3,262,561	-				-1.6
3,262,572	+				-0.5
3,262,582	+				-0.5
3,262,636	-				+0.3
3,262,637	+				-1.6
3,262,637	+				-1.6
3,262,660	+				-0.1
3,262,702	-				-3.8
3,262,714	+				-0.2
3,262,714	+				-0.7
3,262,715	-				-1.1
3,262,740	+				-1.3
3,262,741	-				+0.8
3,262,741	-				-2.6
3,262,741	-				-1.1
3,262,744	+				-1.6
3,262,745	-				-2.9
3,262,745	-				-0.1
3,262,747	-				-0.5
3,262,784	+				-0.1
3,262,813	-				-0.2
3,262,817	-				+1.9
3,262,820	+				+0.3
3,262,821	-				-3.2
3,262,836	-				-0.9
3,262,867	-				+0.4
3,262,910	-				-0.1
3,262,944	+				-0.8
3,262,950	+				-2.7
3,262,950	+				-0.2
3,262,997	-				-0.9
3,262,997	-				-1.1
3,263,015	+				-0.5
3,263,016	-				+0.4
3,263,092	-				+0.3
3,263,164	-		BT2620	0.13	-1.1