Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2463

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
3,083,985	+				-2.7
3,083,988	+				+0.5
3,084,057	-		BT2462	0.15	-0.1
3,084,076	+		BT2462	0.17	-4.1
3,084,077	-		BT2462	0.18	+0.9
3,084,077	-		BT2462	0.18	-3.5
3,084,077	-		BT2462	0.18	-4.1
3,084,087	+		BT2462	0.19	-4.0
3,084,131	+		BT2462	0.23	-2.0
3,084,132	-		BT2462	0.23	-2.4
3,084,155	-		BT2462	0.26	-0.6
3,084,164	+		BT2462	0.27	-0.5
3,084,164	+		BT2462	0.27	-3.2
3,084,199	-		BT2462	0.31	-1.1
3,084,237	+		BT2462	0.35	-1.1
3,084,294	+		BT2462	0.41	-0.7
3,084,294	+		BT2462	0.41	-1.9
3,084,296	+		BT2462	0.41	-2.1
3,084,296	+		BT2462	0.41	-2.7
3,084,297	-		BT2462	0.41	-1.5
3,084,297	-		BT2462	0.41	-0.9
3,084,300	-		BT2462	0.41	-2.4
3,084,300	-		BT2462	0.41	-2.4
3,084,389	+		BT2462	0.51	-2.5
3,084,426	+		BT2462	0.55	-2.2
3,084,489	+		BT2462	0.62	-0.1
3,084,489	+		BT2462	0.62	-0.2
3,084,513	+		BT2462	0.64	-3.3
3,084,513	+		BT2462	0.64	-2.9
3,084,513	+		BT2462	0.64	-2.4
3,084,514	-		BT2462	0.64	-1.6
3,084,612	-		BT2462	0.75	-0.1
3,084,637	-		BT2462	0.77	-3.1
3,084,637	-		BT2462	0.77	-0.1
3,084,642	-		BT2462	0.78	+1.5
3,084,684	+		BT2462	0.82	-2.3
3,084,702	-		BT2462	0.84	+0.9
3,084,724	+		BT2462	0.87	-2.1
3,084,731	+		BT2462	0.87	-1.2
3,084,745	+		BT2462	0.89	-0.4
3,084,838	-				-0.5
3,084,869	+				-1.1
3,084,870	-				+0.9
3,084,872	-				-1.6
3,084,952	+				-2.7
3,084,953	-				-0.6
3,084,973	+				-0.5
3,085,016	+		BT2463	0.11	-0.2
3,085,016	+		BT2463	0.11	-3.2
3,085,017	-		BT2463	0.12	+1.9
3,085,029	+		BT2463	0.14	-0.1
3,085,030	-		BT2463	0.14	-1.1
3,085,031	+		BT2463	0.14	+1.5
3,085,032	-		BT2463	0.14	-2.6
3,085,112	+		BT2463	0.28	+0.1
3,085,113	-		BT2463	0.28	-1.1
3,085,117	-		BT2463	0.29	-0.1
3,085,137	+		BT2463	0.33	+2.5
3,085,138	-		BT2463	0.33	+0.9
3,085,138	-		BT2463	0.33	+1.5
3,085,185	+		BT2463	0.41	-0.1
3,085,186	-		BT2463	0.41	-0.2
3,085,199	+		BT2463	0.44	+0.5
3,085,200	-		BT2463	0.44	+0.6
3,085,230	+		BT2463	0.49	-0.6
3,085,230	+		BT2463	0.49	-3.3
3,085,294	-		BT2463	0.60	-1.6
3,085,294	-		BT2463	0.60	-2.2
3,085,298	-		BT2463	0.61	-0.1
3,085,311	-		BT2463	0.63	+1.2
3,085,403	+		BT2463	0.79	+0.9
3,085,403	+		BT2463	0.79	-0.2
3,085,430	+		BT2463	0.84	-0.6
3,085,433	-		BT2463	0.85	-2.2
3,085,433	-		BT2463	0.85	-1.1
3,085,433	-		BT2463	0.85	-0.4
3,085,474	+				-0.9
3,085,475	-				-0.5
3,085,475	-				+0.9
3,085,475	-				+0.9
3,085,485	-				-0.5
3,085,534	-				-1.3
3,085,563	+				+0.4
3,085,573	+				+0.9
3,085,602	-				+1.2
3,085,617	+				+1.7
3,085,617	+				-0.1
3,085,623	+				+0.9
3,085,749	-		BT2464	0.34	-0.4
3,085,758	-		BT2464	0.37	-2.5
3,085,763	-		BT2464	0.39	-1.1
3,085,765	+		BT2464	0.40	-0.6
3,085,790	-		BT2464	0.49	-2.7
3,085,793	+		BT2464	0.51	+0.1
3,085,793	+		BT2464	0.51	-2.2
3,085,793	+		BT2464	0.51	-0.1
3,085,794	-		BT2464	0.51	-1.9
3,085,794	-		BT2464	0.51	-0.5
3,085,889	-		BT2464	0.87	-0.1
3,085,903	+				-1.6
3,085,904	-				-1.1
3,085,914	-				+0.3
3,085,915	+				-0.1
3,085,915	+				-0.1
3,085,918	+				-0.1
3,085,972	+				-1.5
3,085,973	-				-2.4
3,085,976	-				+0.5
3,086,005	+				-0.1
3,086,077	-				-2.1
3,086,077	-				-2.3
3,086,086	+				+0.3
3,086,107	+				-0.6
3,086,111	+				-1.1
3,086,153	-				-0.9
3,086,153	-				-1.1
3,086,153	-				-0.8
3,086,153	-				-0.3
3,086,196	+				-2.1
3,086,264	-				-2.6
3,086,267	-				-0.1
3,086,267	-				-2.3
3,086,280	-				-1.0
3,086,282	-				+1.5
3,086,288	-				-1.1
3,086,289	+				-2.8
3,086,397	-				-0.1
3,086,410	+				-0.1
3,086,411	-				-0.1
3,086,411	-				+0.5
3,086,411	-				-0.5
3,086,412	+				-1.1
3,086,413	-				+0.5
3,086,418	+				-0.1
3,086,418	+				-0.6
3,086,421	-				-2.1
3,086,444	-				-0.5
3,086,492	-				-1.6
3,086,507	-				-0.6
3,086,508	+				-1.1