Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1163

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
1,449,292	+		BT1162	0.33	-0.1
1,449,293	-		BT1162	0.33	-0.1
1,449,293	-		BT1162	0.33	-1.7
1,449,379	+		BT1162	0.40	-1.7
1,449,509	+		BT1162	0.50	-0.1
1,449,509	+		BT1162	0.50	+0.1
1,449,510	-		BT1162	0.50	+0.5
1,449,578	+		BT1162	0.56	-0.1
1,449,579	-		BT1162	0.56	+0.5
1,449,824	+		BT1162	0.76	-0.1
1,449,825	-		BT1162	0.76	-1.1
1,449,886	-		BT1162	0.81	-0.1
1,449,939	+		BT1162	0.85	-1.7
1,449,940	-		BT1162	0.85	-2.1
1,449,993	+		BT1162	0.90	-2.1
1,449,994	-		BT1162	0.90	+0.9
1,450,126	+				-1.1
1,450,141	-				-1.7
1,450,212	-				+0.9
1,450,213	+				-2.1
1,450,278	-				+1.1
1,450,280	+				-0.3
1,450,322	+		BT1163	0.10	-3.2
1,450,365	+		BT1163	0.16	-1.7
1,450,425	-		BT1163	0.24	+1.5
1,450,425	-		BT1163	0.24	-0.1
1,450,425	-		BT1163	0.24	-1.1
1,450,429	-		BT1163	0.24	+0.5
1,450,516	+		BT1163	0.36	-0.1
1,450,522	-		BT1163	0.37	-1.7
1,450,602	+		BT1163	0.47	+1.2
1,450,608	-		BT1163	0.48	+0.9
1,450,682	+		BT1163	0.58	-0.1
1,450,745	+		BT1163	0.67	+0.9
1,450,815	-		BT1163	0.76	-1.1
1,450,821	+		BT1163	0.77	+1.5
1,450,821	+		BT1163	0.77	+0.9
1,450,824	+		BT1163	0.77	-2.9
1,450,855	-		BT1163	0.81	+0.7
1,450,934	+				-0.7
1,450,935	-				-1.1
1,450,947	-				-2.9
1,451,012	+				-3.9
1,451,022	-				+0.9
1,451,024	-				-1.1
1,451,059	-				-1.7
1,451,097	-				-0.1
1,451,128	+				-1.1
1,451,133	+				-1.7
1,451,134	-				-2.1
1,451,175	+				-1.4
1,451,233	-		BT1164	0.10	-2.9
1,451,285	+		BT1164	0.13	-1.7
1,451,358	+		BT1164	0.16	-0.3
1,451,358	+		BT1164	0.16	-1.1
1,451,359	-		BT1164	0.16	-1.9
1,451,360	+		BT1164	0.16	-0.1
1,451,406	+		BT1164	0.18	-3.1
1,451,483	+		BT1164	0.21	+0.9
1,451,491	-		BT1164	0.22	-1.1
1,451,519	+		BT1164	0.23	-1.1
1,451,521	+		BT1164	0.23	-1.8
1,451,582	+		BT1164	0.26	-0.2
1,451,582	+		BT1164	0.26	-0.3
1,451,611	+		BT1164	0.27	-1.1
1,451,614	+		BT1164	0.27	-0.1
1,451,738	-		BT1164	0.33	-1.1
1,451,761	+		BT1164	0.34	-2.1
1,451,762	-		BT1164	0.34	-0.1
1,451,783	-		BT1164	0.35	-1.7
1,451,801	+		BT1164	0.36	-1.1
1,451,861	+		BT1164	0.38	-2.4