Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT_t28
Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) |
|---|---|---|---|---|---|
| remove | |||||
| 1,954,772 | + | BT1591 | 0.88 | -1.0 | |
| 1,954,773 | - | BT1591 | 0.88 | +0.5 | |
| 1,954,773 | - | BT1591 | 0.88 | -2.0 | |
| 1,954,777 | - | BT1591 | 0.88 | -3.2 | |
| 1,954,777 | - | BT1591 | 0.88 | -0.0 | |
| 1,954,800 | - | BT1591 | 0.89 | -1.0 | |
| 1,954,854 | + | -2.3 | |||
| 1,954,855 | - | -1.0 | |||
| 1,954,960 | + | -1.6 | |||
| 1,954,964 | - | -0.0 | |||
| 1,954,966 | - | -0.0 | |||
| 1,955,011 | + | -1.3 | |||
| 1,955,011 | + | +0.5 | |||
| 1,955,012 | - | -1.0 | |||
| 1,955,155 | - | -2.6 | |||
| 1,955,231 | + | -2.2 | |||
| 1,955,347 | - | -1.0 | |||
| 1,955,398 | + | -1.2 | |||
| 1,955,398 | + | -1.0 | |||
| 1,955,497 | - | +0.3 | |||
| 1,955,504 | + | -2.0 | |||
| 1,955,784 | + | -1.6 |
Or see this region's nucleotide sequence