Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4572

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
5,992,181	+		BT4570	0.37	-1.7
5,992,424	+				-0.1
5,992,468	+				-0.1
5,992,469	-				-0.1
5,992,472	+				-1.7
5,992,473	-				-2.4
5,992,531	+		BT4571	0.17	+1.5
5,992,612	+		BT4571	0.31	-0.5
5,992,613	-		BT4571	0.32	-1.1
5,992,613	-		BT4571	0.32	-1.1
5,992,664	-		BT4571	0.41	-0.1
5,992,773	+		BT4571	0.60	+0.5
5,993,014	+				-1.1
5,993,018	-				-1.1
5,993,019	+				-1.9
5,993,024	+				-0.5
5,993,029	-				-0.1
5,993,053	-				-0.3
5,993,130	-				-0.1
5,993,152	+				-0.1
5,993,199	-				-2.6
5,993,209	-				-1.1
5,993,322	+		BT4572	0.15	-0.6
5,993,325	-		BT4572	0.15	-0.2
5,993,467	+		BT4572	0.26	-0.8
5,993,643	+		BT4572	0.40	+1.9
5,993,644	-		BT4572	0.40	-0.5
5,993,644	-		BT4572	0.40	-0.1
5,993,645	+		BT4572	0.40	+1.1
5,993,645	+		BT4572	0.40	-0.1
5,993,652	-		BT4572	0.41	+0.4
5,993,652	-		BT4572	0.41	-0.1
5,993,656	-		BT4572	0.41	+0.2
5,993,857	+		BT4572	0.57	+0.9
5,993,967	+		BT4572	0.65	-1.7
5,993,993	+		BT4572	0.68	-2.5
5,993,994	-		BT4572	0.68	+1.5
5,993,997	+		BT4572	0.68	-0.1
5,993,998	-		BT4572	0.68	-2.4
5,994,015	-		BT4572	0.69	+0.2
5,994,038	+		BT4572	0.71	-1.5
5,994,070	+		BT4572	0.74	+0.9
5,994,070	+		BT4572	0.74	-4.1
5,994,095	-		BT4572	0.75	-0.4
5,994,114	+		BT4572	0.77	+0.5
5,994,169	-		BT4572	0.81	-0.7
5,994,334	+				-0.6
5,994,349	+				-2.1
5,994,427	+				-1.8
5,994,474	-				-1.9
5,994,475	+				+0.1
5,994,479	+				-0.7
5,994,480	-				-1.1
5,994,484	-				-3.8
5,994,505	+				-0.1
5,994,506	-				-0.1
5,994,516	-				+0.5
5,994,582	-				-0.7
5,994,602	+				-2.7
5,994,671	+		BT4573	0.13	-1.3
5,994,681	+		BT4573	0.14	-0.7
5,994,702	-		BT4573	0.17	-0.1
5,994,832	-		BT4573	0.37	-1.7
5,995,011	+		BT4573	0.64	+0.6
5,995,013	+		BT4573	0.64	+1.5
5,995,090	+		BT4573	0.76	-2.7
5,995,091	-		BT4573	0.76	-1.7
5,995,181	+		BT4573	0.89	-0.5
5,995,257	+				+0.1
5,995,257	+				-1.1
5,995,262	-				-1.1
5,995,290	+				-1.4
5,995,300	-				-1.8
5,995,306	+				+1.5
5,995,306	+				-0.1
5,995,307	-				-0.1
5,995,307	-				-1.3
5,995,334	+		BT4574	0.17	+0.0
5,995,335	-		BT4574	0.17	-1.1
5,995,338	+		BT4574	0.18	-0.5