Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4155

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
5,456,503	-				-0.1
5,456,534	-				-3.2
5,456,542	-				+1.2
5,456,544	-				-1.4
5,456,552	+		BT4154	0.10	-2.6
5,456,572	-		BT4154	0.12	-2.2
5,456,666	+		BT4154	0.22	-0.1
5,456,666	+		BT4154	0.22	-0.5
5,456,667	-		BT4154	0.22	-2.1
5,456,672	-		BT4154	0.22	-2.8
5,456,675	+		BT4154	0.23	-1.1
5,456,820	-		BT4154	0.38	-0.1
5,456,840	+		BT4154	0.40	-4.0
5,456,840	+		BT4154	0.40	-1.9
5,456,841	-		BT4154	0.40	+0.8
5,456,860	+		BT4154	0.42	-1.4
5,456,861	-		BT4154	0.42	-1.1
5,456,861	-		BT4154	0.42	+0.1
5,456,861	-		BT4154	0.42	-0.9
5,457,005	+		BT4154	0.57	-2.5
5,457,005	+		BT4154	0.57	-1.4
5,457,035	-		BT4154	0.60	-1.6
5,457,057	+		BT4154	0.62	-1.1
5,457,058	-		BT4154	0.62	+0.9
5,457,063	+		BT4154	0.63	-0.2
5,457,140	-		BT4154	0.71	+0.3
5,457,166	-		BT4154	0.73	-0.9
5,457,216	-		BT4154	0.79	-2.4
5,457,240	-		BT4154	0.81	-2.4
5,457,390	-				-1.3
5,457,448	-				-1.1
5,457,454	+				-0.1
5,457,484	+				-1.4
5,457,484	+				+0.7
5,457,485	-				-1.1
5,457,485	-				-0.5
5,457,485	-				+0.9
5,457,489	-				-1.1
5,457,489	-				+1.3
5,457,521	-				-0.6
5,457,618	-				-2.5
5,457,689	+		BT4155	0.15	+0.5
5,457,748	+		BT4155	0.19	-1.5
5,457,755	+		BT4155	0.20	-0.6
5,457,764	+		BT4155	0.20	-1.1
5,457,765	-		BT4155	0.20	-2.6
5,457,766	+		BT4155	0.21	-0.5
5,457,766	+		BT4155	0.21	-0.1
5,457,767	-		BT4155	0.21	+0.9
5,457,778	+		BT4155	0.21	-0.7
5,457,822	+		BT4155	0.25	+1.5
5,457,822	+		BT4155	0.25	+1.5
5,457,871	-		BT4155	0.28	+0.3
5,457,880	+		BT4155	0.29	-2.3
5,457,931	+		BT4155	0.33	-0.1
5,457,932	-		BT4155	0.33	-0.1
5,458,005	+		BT4155	0.38	-3.5
5,458,008	-		BT4155	0.39	+0.2
5,458,027	+		BT4155	0.40	-0.4
5,458,036	+		BT4155	0.41	-1.1
5,458,085	-		BT4155	0.44	+0.4
5,458,124	+		BT4155	0.47	-0.2
5,458,125	-		BT4155	0.47	-0.1
5,458,218	-		BT4155	0.54	-0.7
5,458,226	+		BT4155	0.55	-2.4
5,458,248	-		BT4155	0.56	-0.1
5,458,248	-		BT4155	0.56	-1.1
5,458,352	+		BT4155	0.64	+0.9
5,458,353	-		BT4155	0.64	+0.4
5,458,354	+		BT4155	0.64	+0.1
5,458,354	+		BT4155	0.64	-2.6
5,458,426	+		BT4155	0.70	+0.4
5,458,426	+		BT4155	0.70	-1.1
5,458,437	+		BT4155	0.70	+2.8
5,458,437	+		BT4155	0.70	-0.6
5,458,438	-		BT4155	0.70	-0.7
5,458,438	-		BT4155	0.70	+1.5
5,458,439	+		BT4155	0.71	-0.4
5,458,439	+		BT4155	0.71	-0.2
5,458,439	+		BT4155	0.71	-1.4
5,458,440	-		BT4155	0.71	-1.1
5,458,452	-		BT4155	0.71	-0.6
5,458,515	-		BT4155	0.76	-0.6
5,458,524	-		BT4155	0.77	-1.4
5,458,527	+		BT4155	0.77	-0.1
5,458,527	+				-1.1
5,458,607	-		BT4155	0.83	-0.1
5,458,618	-		BT4155	0.84	+1.5
5,458,650	+		BT4155	0.86	-0.1
5,458,650	+		BT4155	0.86	+0.0
5,458,650	+		BT4155	0.86	-0.5
5,458,650	+		BT4155	0.86	-2.4
5,458,650	+		BT4155	0.86	-1.6
5,458,663	+		BT4155	0.87	-0.5
5,458,689	+		BT4155	0.89	+0.5
5,458,744	+				-0.4
5,458,780	+				+0.7
5,458,780	+				-2.9
5,458,784	+				-0.5
5,458,784	+				-1.1
5,458,814	-				-1.9
5,458,818	+				-0.1
5,458,853	-				-1.1
5,458,939	+				-0.8
5,458,939	+				-1.1
5,458,942	-				-0.6
5,458,944	-				-0.2
5,458,948	+				-1.1
5,458,949	-				-0.1
5,458,949	-				-0.1
5,458,949	-				-0.1
5,458,990	+				-1.9
5,459,020	-				-0.8
5,459,127	+				-1.1
5,459,271	-		BT4156	0.11	+0.9
5,459,311	-		BT4156	0.12	+1.8
5,459,312	+		BT4156	0.12	-1.6
5,459,333	+		BT4156	0.13	-1.6
5,459,333	+		BT4156	0.13	-0.1
5,459,369	+		BT4156	0.14	-1.6
5,459,428	-		BT4156	0.16	-0.1
5,459,500	+		BT4156	0.19	-0.1
5,459,516	+		BT4156	0.19	-0.3
5,459,516	+		BT4156	0.19	-0.1
5,459,517	-		BT4156	0.19	-1.1
5,459,568	+		BT4156	0.21	+0.9
5,459,570	+		BT4156	0.21	-1.3
5,459,612	+		BT4156	0.23	-3.1
5,459,644	-		BT4156	0.24	-0.9
5,459,647	+		BT4156	0.24	+1.5
5,459,648	-		BT4156	0.24	-0.7
5,459,648	-		BT4156	0.24	+0.5
5,459,648	-		BT4156	0.24	-0.1
5,459,648	-		BT4156	0.24	-1.1
5,459,648	-		BT4156	0.24	-1.6