Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3773

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
4,892,552	+				-0.8
4,892,552	+				+0.3
4,892,567	+				-1.2
4,892,594	+				-0.2
4,892,596	+				-0.8
4,892,596	+				-2.9
4,892,596	+				-0.7
4,892,596	+				-2.9
4,892,680	-		BT3772	0.17	-1.6
4,892,680	-		BT3772	0.17	-3.0
4,892,695	-		BT3772	0.19	-2.6
4,892,889	+		BT3772	0.48	-2.0
4,892,890	-		BT3772	0.48	-4.0
4,893,094	-		BT3772	0.78	-1.0
4,893,371	-				-1.6
4,893,491	-				-4.4
4,893,517	+				+0.6
4,893,517	+				-1.0
4,893,530	-				-1.2
4,893,530	-				-2.4
4,893,558	-				+1.0
4,893,558	-				+0.0
4,893,562	+				-0.3
4,893,615	+				-0.6
4,893,647	-		BT3773	0.10	-1.5
4,893,647	-		BT3773	0.10	+0.0
4,893,687	-		BT3773	0.12	-0.1
4,893,702	+		BT3773	0.13	-0.6
4,893,703	-		BT3773	0.13	-2.8
4,893,727	-		BT3773	0.14	-0.4
4,893,774	-		BT3773	0.16	-2.4
4,893,774	-		BT3773	0.16	+0.2
4,893,774	-		BT3773	0.16	-2.2
4,893,816	-		BT3773	0.18	+0.0
4,893,833	-		BT3773	0.18	+1.0
4,893,853	+		BT3773	0.19	-2.6
4,893,854	-		BT3773	0.19	+0.0
4,893,854	-		BT3773	0.19	+0.0
4,893,858	+		BT3773	0.20	-1.7
4,893,880	-		BT3773	0.21	+1.3
4,893,880	-		BT3773	0.21	-0.6
4,893,880	-		BT3773	0.21	-0.4
4,893,906	+		BT3773	0.22	-1.8
4,893,907	-		BT3773	0.22	-1.0
4,893,907	-		BT3773	0.22	+0.0
4,893,934	-		BT3773	0.23	+1.0
4,893,934	-		BT3773	0.23	-0.6
4,893,935	+		BT3773	0.23	+0.0
4,893,983	-		BT3773	0.25	+0.0
4,893,983	-		BT3773	0.25	-2.6
4,893,983	-		BT3773	0.25	+0.0
4,893,996	-		BT3773	0.26	-0.1
4,894,004	-		BT3773	0.26	-0.2
4,894,005	+		BT3773	0.26	-1.4
4,894,006	-		BT3773	0.26	-0.3
4,894,057	+				-2.3
4,894,102	+		BT3773	0.30	-0.7
4,894,102	+		BT3773	0.30	-3.4
4,894,103	-		BT3773	0.30	+1.2
4,894,194	+		BT3773	0.34	-1.0
4,894,204	-		BT3773	0.35	-1.3
4,894,328	+		BT3773	0.40	+0.0
4,894,363	+		BT3773	0.42	-0.2
4,894,375	+		BT3773	0.42	-0.3
4,894,380	+		BT3773	0.43	+0.0
4,894,440	+		BT3773	0.45	-0.4
4,894,441	-		BT3773	0.45	-2.2
4,894,447	+		BT3773	0.46	-1.6
4,894,473	+		BT3773	0.47	+0.0
4,894,524	+		BT3773	0.49	+1.0
4,894,553	+		BT3773	0.50	+1.3
4,894,645	-		BT3773	0.54	+0.0
4,894,763	-		BT3773	0.60	+1.6
4,894,782	+		BT3773	0.60	-0.5
4,894,782	+		BT3773	0.60	+2.0
4,894,782	+		BT3773	0.60	-2.0
4,894,783	-		BT3773	0.60	-0.6
4,894,828	+		BT3773	0.62	-2.2
4,894,829	-		BT3773	0.63	+0.0
4,894,920	+		BT3773	0.67	-1.4
4,894,928	-		BT3773	0.67	-2.1
4,894,990	+		BT3773	0.70	-1.0
4,895,052	+		BT3773	0.72	+1.0
4,895,052	+		BT3773	0.72	-3.3
4,895,053	-		BT3773	0.72	-1.0
4,895,200	+		BT3773	0.79	+0.0
4,895,231	+		BT3773	0.80	-2.0
4,895,232	-		BT3773	0.80	-1.4
4,895,232	-		BT3773	0.80	-2.3
4,895,232	-		BT3773	0.80	+0.2
4,895,236	+		BT3773	0.81	-0.5
4,895,245	-		BT3773	0.81	+0.4
4,895,245	-		BT3773	0.81	-0.4
4,895,245	-		BT3773	0.81	+0.2
4,895,305	+		BT3773	0.84	-0.0
4,895,365	+		BT3773	0.86	+0.0
4,895,366	-		BT3773	0.86	+0.9
4,895,366	-		BT3773	0.86	+2.0
4,895,389	+		BT3773	0.87	-3.7
4,895,439	+		BT3773	0.89	+0.0
4,895,456	-				-0.2
4,895,479	-				+0.3
4,895,499	-				+2.0
4,895,509	-				-2.3
4,895,512	-				-0.8
4,895,566	-				-1.0
4,895,570	-				-0.5
4,895,580	-				-1.8
4,895,671	-				+1.0
4,895,697	+				-1.0
4,895,697	+				+2.3
4,895,697	+				-2.3
4,895,702	-				+0.2
4,895,745	-				-2.2
4,895,746	+				-1.0
4,895,746	+				+0.0
4,895,747	-				+0.0
4,895,781	-				+0.0
4,895,803	+				+0.4
4,895,804	-				+0.1
4,895,824	-				-2.6
4,895,871	-				-3.6
4,895,891	-				-0.4
4,895,915	-				+0.0
4,895,918	-				-0.2
4,895,918	-				+1.0
4,895,946	-				-1.0
4,896,004	-				-0.2
4,896,020	+				+0.0
4,896,124	+				-0.2
4,896,124	+				+0.0
4,896,125	-				-1.9
4,896,125	-				-1.6
4,896,135	+				-0.2
4,896,136	-				+0.5
4,896,136	-				-0.1
4,896,172	+				-1.0
4,896,172	+				-1.2
4,896,419	-		BT3774	0.13	-0.6
4,896,458	-		BT3774	0.14	-2.3
4,896,531	+		BT3774	0.16	+0.0
4,896,531	+		BT3774	0.16	-1.8
4,896,532	-		BT3774	0.16	+1.0
4,896,533	+		BT3774	0.16	+0.3
4,896,537	+		BT3774	0.17	+0.4
4,896,537	+		BT3774	0.17	-0.6
4,896,660	-		BT3774	0.20	-1.6
4,896,668	-		BT3774	0.20	-2.3