Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3277

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
4,188,609	+		BT3276	0.72	-2.7
4,188,618	-		BT3276	0.72	-0.1
4,188,633	-		BT3276	0.73	+0.1
4,188,643	+		BT3276	0.73	+0.3
4,188,671	+		BT3276	0.74	-1.5
4,188,787	+		BT3276	0.79	+2.6
4,188,827	-		BT3276	0.80	-0.9
4,188,884	+		BT3276	0.83	+1.6
4,188,887	-		BT3276	0.83	+0.1
4,188,910	+		BT3276	0.84	-1.9
4,188,911	-		BT3276	0.84	+1.4
4,188,911	-		BT3276	0.84	-1.2
4,188,915	-		BT3276	0.84	-1.9
4,188,976	-		BT3276	0.86	-0.9
4,189,000	+		BT3276	0.87	+0.1
4,189,033	+		BT3276	0.88	+2.6
4,189,120	+				+0.1
4,189,184	+				+0.1
4,189,212	-				-1.0
4,189,215	-				+1.6
4,189,293	-				+1.1
4,189,319	-				-0.5
4,189,353	-				-1.3
4,189,364	+				-0.1
4,189,395	+				-1.5
4,189,396	-				-1.5
4,189,396	-				+0.1
4,189,453	-				-0.9
4,189,509	+				-2.5
4,189,669	-		BT3277	0.12	-1.2
4,189,680	+		BT3277	0.14	-0.0
4,189,705	+		BT3277	0.18	-0.1
4,189,706	-		BT3277	0.18	-0.2
4,189,740	-		BT3277	0.24	-0.1
4,189,813	-		BT3277	0.37	+1.1
4,189,813	-		BT3277	0.37	-0.2
4,189,819	-		BT3277	0.38	-1.5
4,189,820	+		BT3277	0.38	-0.7
4,189,849	-		BT3277	0.43	-0.4
4,189,860	-		BT3277	0.45	+0.1
4,189,879	-		BT3277	0.49	-0.5
4,189,879	-		BT3277	0.49	-2.1
4,189,917	-		BT3277	0.55	+0.5
4,190,003	+		BT3277	0.70	-0.3
4,190,022	+		BT3277	0.74	+1.1
4,190,024	+		BT3277	0.74	-0.9
4,190,025	-		BT3277	0.74	+1.1
4,190,136	+				-2.5
4,190,136	+				+0.6
4,190,149	+				-0.9
4,190,181	+				-0.8
4,190,182	-				+0.1
4,190,374	+				-1.2
4,190,390	+				-0.1
4,190,424	+				-0.7
4,190,424	+				-1.3
4,190,469	-				+1.1
4,190,484	-				-0.9
4,190,493	+		BT3278	0.10	+0.1
4,190,493	+		BT3278	0.10	-0.9
4,190,532	+		BT3278	0.14	-1.6
4,190,533	-		BT3278	0.14	-0.9
4,190,623	+		BT3278	0.21	-2.5
4,190,648	-		BT3278	0.23	-0.7
4,190,729	+		BT3278	0.30	-0.2
4,190,729	+		BT3278	0.30	+0.1
4,190,736	-		BT3278	0.31	-2.5
4,190,823	-		BT3278	0.38	-2.3
4,190,934	-		BT3278	0.48	-2.5
4,190,934	-		BT3278	0.48	+0.3
4,190,994	+		BT3278	0.53	+0.1
4,190,999	+		BT3278	0.53	-2.5
4,191,008	-		BT3278	0.54	+0.1
4,191,048	+		BT3278	0.57	-1.9
4,191,154	+		BT3278	0.66	+0.5
4,191,154	+		BT3278	0.66	-1.8
4,191,159	-		BT3278	0.67	-0.9