Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1988

Experiment: Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
2,497,177	-		BT1987	0.75	+1.2
2,497,214	+		BT1987	0.76	+2.0
2,497,215	-		BT1987	0.76	-3.0
2,497,224	+		BT1987	0.77	-2.6
2,497,224	+		BT1987	0.77	-1.2
2,497,225	-		BT1987	0.77	-2.6
2,497,257	+		BT1987	0.78	-0.0
2,497,257	+		BT1987	0.78	-1.4
2,497,258	-		BT1987	0.78	-0.0
2,497,320	-		BT1987	0.81	-2.8
2,497,417	+		BT1987	0.85	+0.7
2,497,417	+		BT1987	0.85	-2.0
2,497,473	+		BT1987	0.87	-1.0
2,497,473	+		BT1987	0.87	-2.3
2,497,474	-		BT1987	0.87	+1.0
2,497,474	-		BT1987	0.87	-0.4
2,497,474	-		BT1987	0.87	-2.9
2,497,482	-		BT1987	0.87	-0.0
2,497,587	-				+0.6
2,497,731	+				+0.3
2,497,752	-				-0.0
2,497,752	-				-0.8
2,497,756	-				+0.4
2,498,004	-				-0.0
2,498,004	-				-0.0
2,498,006	-				+0.5
2,498,006	-				-3.6
2,498,027	+				+0.4
2,498,047	+				-2.3
2,498,048	-				+0.6
2,498,071	+				-1.0
2,498,090	-				-1.6
2,498,181	+		BT1988	0.29	-1.1
2,498,183	+		BT1988	0.30	-2.7
2,498,184	-		BT1988	0.30	-2.6
2,498,360	+				-0.3
2,498,361	-				-1.6
2,498,361	-				-2.3
2,498,379	+				-0.4
2,498,381	+				-1.0
2,498,540	+				-0.4
2,498,540	+				-1.6
2,498,540	+				-1.0
2,498,541	-				+1.0
2,498,544	+				-1.0
2,498,547	+				+1.0
2,498,602	+				+0.5
2,498,603	-				-1.6
2,498,608	+				-1.0
2,498,608	+				-1.8
2,498,608	+				-1.3
2,498,608	+				-2.9
2,498,608	+				-0.7
2,498,608	+				-0.3
2,498,608	+				-1.6
2,498,609	-				-0.4
2,498,609	-				-2.3
2,498,612	+				-0.7
2,498,625	-				-1.9
2,498,639	+				-0.6
2,498,643	-				-1.3
2,498,711	+		BT1989	0.13	-1.5
2,498,853	+		BT1989	0.26	-1.9
2,498,872	-		BT1989	0.27	+1.0
2,498,909	+		BT1989	0.31	+1.0
2,498,915	+		BT1989	0.31	+1.6
2,498,920	-		BT1989	0.32	+1.0
2,498,931	-		BT1989	0.33	-0.0
2,498,943	+		BT1989	0.34	-2.3
2,498,944	-		BT1989	0.34	-2.3
2,498,944	-		BT1989	0.34	-2.0
2,498,949	-		BT1989	0.35	-1.9
2,498,954	+		BT1989	0.35	+0.5
2,499,059	-		BT1989	0.45	-3.2
2,499,085	-		BT1989	0.47	+0.4
2,499,154	-		BT1989	0.53	-1.0
2,499,168	+		BT1989	0.55	-3.8
2,499,168	+		BT1989	0.55	-1.0
2,499,169	-		BT1989	0.55	-1.6
2,499,169	-		BT1989	0.55	-0.0
2,499,169	-		BT1989	0.55	-2.4
2,499,169	-		BT1989	0.55	+2.0
2,499,185	-		BT1989	0.56	+1.3
2,499,198	+		BT1989	0.58	+0.2
2,499,214	-		BT1989	0.59	-2.2
2,499,214	-		BT1989	0.59	-0.0
2,499,278	-		BT1989	0.65	-2.5
2,499,308	-		BT1989	0.68	+1.0
2,499,342	+		BT1989	0.71	-1.0
2,499,343	-		BT1989	0.71	-0.6
2,499,343	-		BT1989	0.71	-3.6
2,499,343	-		BT1989	0.71	-1.8
2,499,346	+		BT1989	0.71	+1.6
2,499,346	+		BT1989	0.71	-2.2
2,499,347	-		BT1989	0.71	-0.6
2,499,347	-		BT1989	0.71	-1.0