Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0938

Experiment: dextran, Mw ~200,000; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dextran, Mw ~200,000; filtered 2.5 mg/ml (C)
1,147,968	+				-1.0
1,148,013	+				-0.3
1,148,014	-				-1.0
1,148,017	+				-1.2
1,148,017	+				-0.0
1,148,017	+				-0.0
1,148,018	-				-1.0
1,148,020	-				-1.0
1,148,036	+				-1.0
1,148,041	-				-1.0
1,148,049	-		BT0936	0.12	-1.6
1,148,109	-		BT0936	0.31	-0.6
1,148,120	-		BT0936	0.35	-1.6
1,148,159	+		BT0936	0.48	-1.6
1,148,218	-		BT0936	0.67	+1.6
1,148,243	-		BT0936	0.76	+1.0
1,148,295	+				+2.0
1,148,296	-				-2.2
1,148,319	+				+1.6
1,148,334	+				-2.9
1,148,334	+				-0.6
1,148,370	+		BT0937	0.19	+1.2
1,148,407	+		BT0937	0.33	-2.0
1,148,467	-		BT0937	0.57	+0.4
1,148,660	+				-0.0
1,148,693	+				-1.2
1,148,696	+				-0.0
1,148,699	+				-1.0
1,148,826	+				-1.2
1,148,917	-				-1.0
1,148,977	+				-1.8
1,148,992	+		BT0938	0.11	-1.0
1,148,999	+		BT0938	0.12	-1.0
1,149,004	+		BT0938	0.14	-0.7
1,149,097	+		BT0938	0.40	-2.1
1,149,124	+		BT0938	0.47	-2.3
1,149,175	-		BT0938	0.61	-0.0
1,149,195	+		BT0938	0.67	-0.0
1,149,215	+		BT0938	0.72	-1.6
1,149,222	+		BT0938	0.74	-2.6
1,149,229	-		BT0938	0.76	-1.0
1,149,233	-		BT0938	0.78	-1.6
1,149,316	-				-1.4
1,149,338	-				-1.0
1,149,372	+				+0.6
1,149,372	+				-0.0
1,149,373	-				-2.3
1,149,428	-				-1.0
1,149,443	-				-0.8
1,149,507	+				-1.6
1,149,508	-				-2.3
1,149,576	-		BT0939	0.34	-0.5
1,149,627	+		BT0939	0.54	-0.6
1,149,630	-		BT0939	0.56	-1.6
1,149,676	+		BT0939	0.74	-0.0
1,149,713	-		BT0939	0.88	-1.1
1,149,780	+				-2.1
1,149,817	-				-1.0
1,149,894	+				-0.0
1,149,940	-				-1.6
1,149,986	-		BT0940	0.11	-0.0
1,150,020	-		BT0940	0.18	-1.0
1,150,020	-		BT0940	0.18	-0.0
1,150,095	+		BT0940	0.34	-2.0
1,150,166	+		BT0940	0.49	+1.0
1,150,176	+		BT0940	0.52	-0.0
1,150,176	+		BT0940	0.52	+1.6
1,150,199	+		BT0940	0.57	-1.0
1,150,210	-		BT0940	0.59	-1.0
1,150,215	+		BT0940	0.60	-2.6
1,150,278	+		BT0940	0.74	-1.7
1,150,278	+		BT0940	0.74	-2.0
1,150,279	-		BT0940	0.74	-0.0
1,150,311	+		BT0940	0.81	-0.0