Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1634

Experiment: dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C)
2,019,164	+				-1.7
2,019,232	+				-3.0
2,019,261	-				-0.0
2,019,336	-				-0.9
2,019,490	-		BT1633	0.19	-0.0
2,019,580	-		BT1633	0.31	-0.0
2,019,743	+		BT1633	0.53	-0.4
2,019,743	+		BT1633	0.53	-0.3
2,019,880	-		BT1633	0.71	-0.6
2,019,924	+		BT1633	0.77	+1.0
2,019,938	-		BT1633	0.79	-0.0
2,019,948	+		BT1633	0.80	-3.4
2,019,949	-		BT1633	0.80	+0.7
2,019,959	-		BT1633	0.82	-1.0
2,020,091	-				+1.0
2,020,124	+				-1.5
2,020,134	-				-0.8
2,020,260	-		BT1634	0.11	-0.6
2,020,277	+		BT1634	0.12	-2.0
2,020,277	+		BT1634	0.12	-2.6
2,020,278	-		BT1634	0.12	+0.2
2,020,280	-		BT1634	0.12	-0.3
2,020,299	+		BT1634	0.14	-0.9
2,020,299	+		BT1634	0.14	-0.0
2,020,299	+		BT1634	0.14	-1.0
2,020,310	-		BT1634	0.14	+1.6
2,020,394	-		BT1634	0.20	-0.0
2,020,403	-		BT1634	0.21	+1.1
2,020,415	+		BT1634	0.22	-0.6
2,020,442	-		BT1634	0.24	-1.8
2,020,485	-		BT1634	0.27	-0.3
2,020,583	-		BT1634	0.33	+1.0
2,020,598	-		BT1634	0.35	-0.5
2,020,751	-		BT1634	0.45	-1.0
2,020,791	-		BT1634	0.48	-1.0
2,020,792	+		BT1634	0.48	-0.0
2,020,821	-		BT1634	0.50	-0.0
2,020,867	+		BT1634	0.53	-0.5
2,021,065	+		BT1634	0.67	-2.0
2,021,071	+		BT1634	0.68	+2.8
2,021,163	+		BT1634	0.74	-1.0
2,021,288	-		BT1634	0.83	-0.4
2,021,291	-		BT1634	0.83	+0.6
2,021,291	-		BT1634	0.83	-1.3
2,021,363	-		BT1634	0.88	-0.0
2,021,363	-		BT1634	0.88	-0.4
2,021,464	-				-0.0
2,021,474	+				-1.6
2,021,475	-				+0.6
2,021,498	-				-0.6
2,021,509	-				-1.4
2,021,518	-				-1.1
2,021,576	+				-2.8
2,021,577	-				-0.0
2,021,660	-				-1.0
2,021,682	-				-1.0
2,021,682	-				+1.0
2,021,750	+				-1.0
2,021,750	+				-0.0
2,021,750	+				-0.4
2,021,754	-				-1.0
2,021,781	+				-2.0
2,021,959	+				-1.1
2,021,959	+				-0.0
2,022,088	-		BT1635	0.11	-1.6
2,022,250	-		BT1635	0.15	-0.9
2,022,278	+		BT1635	0.15	-1.6
2,022,314	-		BT1635	0.16	-2.8
2,022,359	+		BT1635	0.17	-3.1
2,022,374	+		BT1635	0.18	+0.7
2,022,410	+		BT1635	0.19	-0.3
2,022,411	-		BT1635	0.19	-1.0
2,022,411	-		BT1635	0.19	-0.0
2,022,411	-		BT1635	0.19	-0.6
2,022,411	-		BT1635	0.19	-1.4
2,022,411	-		BT1635	0.19	-0.7
2,022,447	+		BT1635	0.20	-1.3
2,022,447	+		BT1635	0.20	-0.8
2,022,477	+		BT1635	0.20	+1.3
2,022,478	-		BT1635	0.20	-1.0