Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32300

Experiment: Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10
2,815,094	+		BPHYT_RS32290	0.83	+3.0
2,817,813	+				-0.3
2,817,848	+				-0.1
2,817,860	+		BPHYT_RS32305	0.11	-1.6
2,817,948	+		BPHYT_RS32305	0.32	+1.9
2,818,328	-				-0.5
2,818,328	-				+1.0