Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27805

Experiment: Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10
1,798,960	-		BPHYT_RS27800	0.31	+0.9
1,798,960	-		BPHYT_RS27800	0.31	-0.0
1,799,621	+		BPHYT_RS27800	0.83	+0.6
1,799,621	+		BPHYT_RS27800	0.83	+1.5
1,799,715	+				+1.2
1,799,765	-				+0.4
1,799,796	-				+0.4
1,799,963	-				-0.8
1,800,287	-		BPHYT_RS27805	0.27	+0.1
1,800,667	+		BPHYT_RS27805	0.55	+0.5
1,800,668	-		BPHYT_RS27805	0.55	-0.2
1,801,160	-				-0.6
1,801,164	+				-0.6
1,801,729	-		BPHYT_RS27810	0.22	+0.0
1,801,795	-		BPHYT_RS27810	0.29	-0.8
1,801,795	-		BPHYT_RS27810	0.29	-0.2