Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26510

Experiment: Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10
1,515,670	-				-0.2
1,516,857	-		BPHYT_RS26510	0.21	-1.9
1,516,865	+		BPHYT_RS26510	0.22	-1.7
1,517,175	-		BPHYT_RS26510	0.56	-0.0
1,517,595	+				-0.9
1,517,595	+				-0.5
1,517,875	+		BPHYT_RS26515	0.46	+2.2
1,517,875	+		BPHYT_RS26515	0.46	+0.5