Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17050

Experiment: Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10
3,863,230	+				+0.8
3,863,230	+				+0.9
3,863,278	+				-0.2
3,863,279	-				+0.7
3,863,686	-		BPHYT_RS17045	0.62	-0.8
3,864,037	-		BPHYT_RS17050	0.27	+1.7
3,864,056	-		BPHYT_RS17050	0.32	+2.1