Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT_0823

Experiment: Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)
1,016,026	+				-0.6
1,016,174	+				-1.4
1,016,242	-				-1.3
1,016,348	-				+1.0
1,016,371	+				-0.0
1,016,411	-				-0.5
1,016,454	+				-1.4
1,016,471	+				-1.2
1,016,471	+				-0.8
1,016,471	+				-0.0
1,016,509	+				-1.6
1,016,510	-				-1.0
1,016,531	+				-2.7
1,016,535	-				+0.5
1,016,537	-				-1.0
1,016,537	-				-1.3
1,016,548	-				-1.6
1,016,557	+				-1.0
1,016,625	+				+0.4
1,016,644	-				+0.3
1,016,752	-				-2.0
1,016,972	+				-2.0
1,016,975	+				-1.6
1,017,027	+				+1.0
1,017,116	+				-0.4
1,017,116	+				-2.0
1,017,117	-				-1.6
1,017,178	+		BT_0823	0.13	+1.5
1,017,320	-		BT_0823	0.23	-2.6
1,017,358	-		BT_0823	0.26	-1.0
1,017,510	+		BT_0823	0.37	-4.0
1,017,569	-		BT_0823	0.41	-1.0
1,017,599	-		BT_0823	0.43	-0.0
1,017,621	-		BT_0823	0.44	-2.0
1,017,621	-		BT_0823	0.44	-1.6
1,017,625	+		BT_0823	0.45	+1.0
1,017,625	+		BT_0823	0.45	-0.0
1,017,628	+		BT_0823	0.45	-1.0
1,017,629	-		BT_0823	0.45	-0.0
1,017,633	-		BT_0823	0.45	+1.0
1,017,670	-		BT_0823	0.48	-1.0
1,017,804	+		BT_0823	0.57	+0.5
1,017,831	-		BT_0823	0.59	-0.0
1,017,941	+		BT_0823	0.67	-1.0
1,017,942	-		BT_0823	0.67	-1.6
1,017,945	-		BT_0823	0.67	+0.5
1,018,099	-		BT_0823	0.78	-2.6
1,018,099	-		BT_0823	0.78	-1.1
1,018,118	-		BT_0823	0.80	+1.5
1,018,119	+		BT_0823	0.80	-0.0
1,018,270	-				-2.0
1,018,280	+				+1.0
1,018,747	-		BT0824	0.10	-1.2
1,018,820	+		BT0824	0.17	-1.0
1,018,822	+		BT0824	0.18	-0.0
1,018,985	-		BT0824	0.33	-0.0
1,019,032	-		BT0824	0.38	-2.0
1,019,147	-		BT0824	0.49	-2.6
1,019,375	+		BT0824	0.71	-0.5