Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1437

Experiment: Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)
1,765,940	+				+2.0
1,765,987	+				+1.0
1,766,060	+				-0.8
1,766,098	+				-0.8
1,766,113	-				-1.4
1,766,164	-				-1.8
1,766,186	-				-1.6
1,766,228	-				-0.0
1,766,286	-		BT1435	0.21	-0.0
1,766,298	-		BT1435	0.25	+1.5
1,766,397	-		BT1435	0.59	-2.2
1,766,399	-		BT1435	0.60	-2.3
1,766,403	-		BT1435	0.61	-0.6
1,766,452	-		BT1435	0.78	-1.6
1,766,452	-		BT1435	0.78	-0.7
1,766,505	-				-1.1
1,766,549	-				-3.2
1,766,550	+				+0.4
1,766,591	+		BT1436	0.13	-1.1
1,766,603	-		BT1436	0.18	-1.8
1,766,610	-		BT1436	0.21	+0.8
1,766,615	-		BT1436	0.23	-0.0
1,766,615	-		BT1436	0.23	-0.0
1,766,622	-		BT1436	0.26	-0.5
1,766,670	-		BT1436	0.46	-0.0
1,766,699	-		BT1436	0.57	-0.0
1,766,719	+		BT1436	0.65	-0.0
1,766,744	+		BT1436	0.76	-1.6
1,766,770	+		BT1436	0.86	-2.4
1,766,771	-		BT1436	0.87	-0.0
1,766,782	+				-1.0
1,766,899	+				-0.2
1,766,917	-				-0.5
1,766,949	+				-1.0
1,767,000	+				+1.0
1,767,050	-				-1.0
1,767,115	+		BT1437	0.19	-1.6
1,767,214	+		BT1437	0.28	+1.0
1,767,214	+		BT1437	0.28	-2.5
1,767,445	+		BT1437	0.48	-0.0
1,767,446	-		BT1437	0.49	-0.0
1,767,508	-		BT1437	0.54	-0.0
1,767,589	+		BT1437	0.61	-0.0
1,767,590	-		BT1437	0.61	-0.0
1,767,595	-		BT1437	0.62	+1.0
1,767,598	+		BT1437	0.62	-1.0
1,767,674	-		BT1437	0.69	-0.0
1,767,693	-		BT1437	0.70	+1.0
1,767,731	-		BT1437	0.74	-0.5
1,767,848	+		BT1437	0.84	-1.4
1,767,869	-		BT1437	0.86	-0.6
1,767,869	-		BT1437	0.86	-0.6
1,768,012	+				-2.4
1,768,034	+				-1.6
1,768,056	-				-2.5
1,768,080	+		BT1438	0.11	-0.5
1,768,120	-		BT1438	0.14	+0.4
1,768,123	+		BT1438	0.15	-0.5
1,768,126	+		BT1438	0.15	+1.0
1,768,126	+		BT1438	0.15	+1.0
1,768,375	-		BT1438	0.32	-0.0
1,768,436	+		BT1438	0.37	-1.4
1,768,806	+		BT1438	0.63	-0.6
1,768,807	-		BT1438	0.63	-1.0
1,768,843	+		BT1438	0.65	-1.0
1,768,930	+		BT1438	0.71	-1.6
1,768,982	-		BT1438	0.75	-1.0
1,768,982	-		BT1438	0.75	+1.5