Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0825

Experiment: Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C)
1,018,747	-		BT0824	0.10	-1.0
1,018,820	+		BT0824	0.17	-1.0
1,018,822	+		BT0824	0.18	-1.4
1,018,985	-		BT0824	0.33	-1.0
1,019,032	-		BT0824	0.38	-1.0
1,019,147	-		BT0824	0.49	-1.6
1,019,375	+		BT0824	0.71	-1.0
1,019,441	+		BT0824	0.78	+1.6
1,019,459	-		BT0824	0.79	-0.4
1,019,693	-				-1.0
1,019,693	-				-0.0
1,019,706	+				-2.2
1,019,861	-				-0.6
1,020,312	+		BT0825	0.43	+1.0
1,020,315	-		BT0825	0.43	-1.3
1,020,315	-		BT0825	0.43	-0.4
1,020,328	-		BT0825	0.44	-0.0
1,020,581	+		BT0825	0.61	+1.6
1,020,775	+		BT0825	0.75	-0.6
1,021,071	+				-3.1
1,021,072	-				-0.0
1,021,091	-				-2.6
1,021,091	-				-0.7
1,021,106	-				-1.6
1,021,142	-				+0.3
1,021,144	+				-0.6
1,021,149	+				-0.0
1,021,195	-				-2.0
1,021,201	-				-1.6
1,021,205	-				-0.0
1,021,210	-				-0.4
1,021,254	+				-0.0
1,021,545	-		BT0826	0.55	-1.0
1,021,582	+		BT0826	0.62	+1.6
1,021,601	-		BT0826	0.65	-0.4
1,021,728	+		BT0826	0.89	-0.0
1,021,766	-				-1.0
1,021,868	-				-0.0
1,021,905	+				-1.6
1,021,907	+				-1.7
1,022,007	-		BT0827	0.19	-1.6