Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4690

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
6,151,779	-		BT4689	0.65	+1.4
6,151,812	+		BT4689	0.67	+0.6
6,151,874	+		BT4689	0.70	-0.0
6,151,874	+		BT4689	0.70	-0.6
6,151,874	+		BT4689	0.70	-1.4
6,151,874	+		BT4689	0.70	-1.2
6,151,875	-		BT4689	0.70	-1.9
6,152,026	-		BT4689	0.78	+1.4
6,152,043	+		BT4689	0.79	+2.0
6,152,153	-		BT4689	0.84	-1.1
6,152,228	+		BT4689	0.88	-1.0
6,152,229	-		BT4689	0.88	+1.0
6,152,236	+		BT4689	0.88	-0.9
6,152,308	-				-0.6
6,152,373	+				-1.2
6,152,374	-				-1.5
6,152,776	+				-1.9
6,152,821	-				-0.6
6,152,861	-				-1.2
6,152,933	+		BT4690	0.12	+0.4
6,152,987	+		BT4690	0.16	-0.7
6,153,036	-		BT4690	0.19	+0.4
6,153,041	-		BT4690	0.19	+0.4
6,153,041	-		BT4690	0.19	-1.4
6,153,041	-		BT4690	0.19	-0.6
6,153,073	+		BT4690	0.22	+0.4
6,153,109	-		BT4690	0.24	-0.6
6,153,196	+		BT4690	0.30	-1.5
6,153,197	-		BT4690	0.30	-1.6
6,153,197	-		BT4690	0.30	-0.2
6,153,338	-		BT4690	0.40	+1.4
6,153,354	+		BT4690	0.41	-3.3
6,153,469	+		BT4690	0.49	-1.2
6,153,582	-		BT4690	0.57	-3.3
6,153,583	+		BT4690	0.57	-2.5
6,153,583	+		BT4690	0.57	+0.1
6,153,584	-		BT4690	0.57	-0.6
6,153,632	+		BT4690	0.60	-1.2
6,153,633	-		BT4690	0.60	-2.2
6,153,635	-		BT4690	0.60	+0.4
6,153,688	-		BT4690	0.64	-1.2
6,153,694	+		BT4690	0.64	-0.6
6,153,780	+		BT4690	0.70	-0.6
6,153,780	+		BT4690	0.70	-0.2
6,153,781	-		BT4690	0.70	-0.3
6,153,806	+		BT4690	0.72	-1.2
6,153,860	+		BT4690	0.76	+0.4
6,153,871	-		BT4690	0.77	-2.8
6,153,909	+		BT4690	0.79	-1.2
6,153,951	+		BT4690	0.82	-0.2
6,154,034	-		BT4690	0.88	-1.2
6,154,040	-		BT4690	0.88	-0.6
6,154,058	-		BT4690	0.90	-1.2
6,154,085	-				-0.2
6,154,137	+				-0.6
6,154,137	+				-0.4
6,154,206	-				-1.6
6,154,210	+				-0.6
6,154,222	-				-2.1
6,154,255	-				-0.6
6,154,277	+				-1.4
6,154,344	-				-0.4
6,154,344	-				-0.6
6,154,357	-				-1.2
6,154,421	+		BT4691	0.10	+0.8
6,154,443	-		BT4691	0.13	-1.2
6,154,507	+		BT4691	0.20	-0.9
6,154,508	-		BT4691	0.20	-0.6
6,154,511	-		BT4691	0.20	-0.6
6,154,544	-		BT4691	0.24	+0.4
6,154,544	-		BT4691	0.24	-1.4
6,154,576	+		BT4691	0.27	-1.2
6,154,577	-		BT4691	0.27	-0.6
6,154,577	-		BT4691	0.27	+1.4
6,154,587	+		BT4691	0.28	-1.2
6,154,623	+		BT4691	0.32	-0.6
6,154,699	-		BT4691	0.41	+1.0
6,154,805	+		BT4691	0.52	-0.2
6,154,805	+		BT4691	0.52	+0.2
6,154,806	-		BT4691	0.52	-0.8
6,154,809	-		BT4691	0.52	-0.3
6,154,882	+		BT4691	0.60	-0.6
6,154,893	-		BT4691	0.62	-0.6
6,154,893	-		BT4691	0.62	-1.2
6,155,045	+		BT4691	0.78	-1.7
6,155,145	-		BT4691	0.89	-0.0
6,155,146	+		BT4691	0.89	+2.4
6,155,147	-		BT4691	0.89	-1.4
6,155,156	+				-0.9
6,155,186	+				-0.6