Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4689

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
6,149,528	-		BT4688	0.14	+0.4
6,149,533	+		BT4688	0.15	+0.4
6,149,534	-		BT4688	0.15	-2.1
6,149,534	-		BT4688	0.15	-1.6
6,149,534	-		BT4688	0.15	-0.2
6,149,583	-		BT4688	0.19	-1.2
6,149,642	-		BT4688	0.25	-0.4
6,149,669	+		BT4688	0.28	-1.2
6,149,670	-		BT4688	0.28	-0.2
6,149,670	-		BT4688	0.28	-0.6
6,149,674	+		BT4688	0.28	+2.7
6,149,697	+		BT4688	0.30	-1.2
6,149,697	+		BT4688	0.30	-2.0
6,149,698	-		BT4688	0.30	-1.8
6,149,732	+				-0.6
6,149,771	+		BT4688	0.37	-0.9
6,149,911	-		BT4688	0.50	-1.2
6,149,981	+		BT4688	0.57	+0.7
6,149,994	-		BT4688	0.58	-1.8
6,150,030	-		BT4688	0.61	-0.6
6,150,141	-		BT4688	0.72	+0.4
6,150,244	-		BT4688	0.82	+0.4
6,150,351	+				-0.5
6,150,365	+				-1.2
6,150,366	-				-2.3
6,150,381	-				+0.4
6,150,384	-				-1.6
6,150,395	+				-0.9
6,150,413	+				-2.4
6,150,446	-				-2.3
6,150,472	+				-0.9
6,150,508	-				-3.3
6,150,601	+				-0.6
6,150,628	+				+1.0
6,150,694	-				-1.6
6,150,706	+		BT4689	0.11	-1.2
6,150,708	+		BT4689	0.11	+0.2
6,150,733	+		BT4689	0.12	-1.6
6,150,778	+		BT4689	0.14	-1.9
6,150,824	-		BT4689	0.17	-0.6
6,150,826	-		BT4689	0.17	+0.4
6,150,894	+		BT4689	0.20	-0.2
6,150,983	+		BT4689	0.25	-1.2
6,150,998	-		BT4689	0.25	-1.7
6,151,060	+		BT4689	0.29	-0.6
6,151,061	-		BT4689	0.29	-0.6
6,151,061	-		BT4689	0.29	+0.4
6,151,061	-		BT4689	0.29	-0.6
6,151,063	-		BT4689	0.29	-1.6
6,151,224	+		BT4689	0.37	-1.5
6,151,225	-		BT4689	0.37	-2.4
6,151,282	+		BT4689	0.40	+0.4
6,151,362	-		BT4689	0.44	-1.6
6,151,406	+		BT4689	0.46	+1.0
6,151,446	-		BT4689	0.48	+1.4
6,151,465	+		BT4689	0.49	-0.2
6,151,578	+		BT4689	0.55	+1.1
6,151,609	-		BT4689	0.57	-1.3
6,151,662	+		BT4689	0.59	-0.6
6,151,682	-		BT4689	0.60	-1.2
6,151,720	+		BT4689	0.62	-0.6
6,151,779	-		BT4689	0.65	+1.4
6,151,812	+		BT4689	0.67	+0.6
6,151,874	+		BT4689	0.70	-0.0
6,151,874	+		BT4689	0.70	-0.6
6,151,874	+		BT4689	0.70	-1.4
6,151,874	+		BT4689	0.70	-1.2
6,151,875	-		BT4689	0.70	-1.9
6,152,026	-		BT4689	0.78	+1.4
6,152,043	+		BT4689	0.79	+2.0
6,152,153	-		BT4689	0.84	-1.1
6,152,228	+		BT4689	0.88	-1.0
6,152,229	-		BT4689	0.88	+1.0
6,152,236	+		BT4689	0.88	-0.9
6,152,308	-				-0.6
6,152,373	+				-1.2
6,152,374	-				-1.5
6,152,776	+				-1.9
6,152,821	-				-0.6
6,152,861	-				-1.2
6,152,933	+		BT4690	0.12	+0.4
6,152,987	+		BT4690	0.16	-0.7
6,153,036	-		BT4690	0.19	+0.4
6,153,041	-		BT4690	0.19	+0.4
6,153,041	-		BT4690	0.19	-1.4
6,153,041	-		BT4690	0.19	-0.6
6,153,073	+		BT4690	0.22	+0.4
6,153,109	-		BT4690	0.24	-0.6
6,153,196	+		BT4690	0.30	-1.5
6,153,197	-		BT4690	0.30	-1.6
6,153,197	-		BT4690	0.30	-0.2
6,153,338	-		BT4690	0.40	+1.4
6,153,354	+		BT4690	0.41	-3.3