Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4513

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,928,936	-		BT4512	0.10	-0.0
5,928,941	+		BT4512	0.11	-0.6
5,928,956	+		BT4512	0.12	-2.0
5,928,956	+		BT4512	0.12	-0.5
5,928,968	+		BT4512	0.13	-0.3
5,929,016	-		BT4512	0.18	-1.2
5,929,016	-		BT4512	0.18	-0.6
5,929,016	-		BT4512	0.18	-0.0
5,929,046	+		BT4512	0.21	+0.4
5,929,046	+		BT4512	0.21	-1.3
5,929,047	-		BT4512	0.21	-1.2
5,929,126	-		BT4512	0.28	+0.4
5,929,166	-		BT4512	0.32	+0.3
5,929,207	+		BT4512	0.36	-1.2
5,929,207	+		BT4512	0.36	-1.9
5,929,207	+		BT4512	0.36	+0.6
5,929,235	+		BT4512	0.39	-0.6
5,929,335	-		BT4512	0.48	-2.2
5,929,409	+		BT4512	0.55	-2.4
5,929,410	-		BT4512	0.55	+1.1
5,929,472	-		BT4512	0.61	-1.9
5,929,665	+		BT4512	0.79	-0.6
5,929,666	-		BT4512	0.80	-1.9
5,929,700	-		BT4512	0.83	-1.2
5,929,755	-		BT4512	0.88	+1.4
5,929,767	-		BT4512	0.89	-0.6
5,929,806	+				+1.7
5,929,807	-				-1.1
5,929,874	+				-1.6
5,929,875	-				-1.6
5,929,884	+				+0.4
5,929,885	-				+0.4
5,929,932	-				+0.1
5,929,968	+		BT4513	0.10	-1.2
5,930,048	+		BT4513	0.20	-0.9
5,930,068	-		BT4513	0.23	-0.3
5,930,126	-		BT4513	0.30	-1.3
5,930,152	-		BT4513	0.33	-2.2
5,930,164	+		BT4513	0.35	-2.2
5,930,274	+		BT4513	0.49	+0.4
5,930,274	+		BT4513	0.49	-1.4
5,930,334	-		BT4513	0.56	-1.2
5,930,343	+		BT4513	0.57	-2.3
5,930,344	-		BT4513	0.57	-1.9
5,930,594	-		BT4513	0.89	-0.6
5,930,597	+		BT4513	0.89	-1.5
5,930,610	+				-0.6
5,930,693	-				-1.6
5,930,751	+				-0.2
5,930,753	+				-1.9
5,930,831	-		BT4514	0.16	+0.7
5,930,841	+		BT4514	0.17	+0.4
5,930,851	-		BT4514	0.18	-0.6
5,930,958	-		BT4514	0.31	-0.6
5,930,958	-		BT4514	0.31	-0.6
5,930,975	-		BT4514	0.33	+0.4
5,931,052	-		BT4514	0.42	-0.2
5,931,074	+		BT4514	0.45	-0.6
5,931,099	-		BT4514	0.48	-1.5
5,931,119	+		BT4514	0.51	+1.4
5,931,119	+		BT4514	0.51	-0.6
5,931,119	+		BT4514	0.51	-0.4
5,931,120	-		BT4514	0.51	-2.1
5,931,177	-		BT4514	0.58	-2.3
5,931,186	+		BT4514	0.59	-0.3
5,931,186	+		BT4514	0.59	-0.3
5,931,187	-		BT4514	0.59	-3.1
5,931,212	+		BT4514	0.62	-1.2
5,931,212	+		BT4514	0.62	-1.2
5,931,258	-		BT4514	0.68	+0.4
5,931,258	-		BT4514	0.68	+0.4
5,931,291	-		BT4514	0.72	-0.9
5,931,291	-		BT4514	0.72	-0.6
5,931,315	+		BT4514	0.75	-1.9
5,931,317	+		BT4514	0.75	-1.0
5,931,375	+		BT4514	0.82	+2.0
5,931,442	-				-0.6
5,931,507	+				-0.6
5,931,507	+				-1.4
5,931,522	+				-1.4
5,931,522	+				-0.6
5,931,523	-				+0.4
5,931,523	-				-0.6
5,931,550	+				-2.4
5,931,550	+				-0.2
5,931,558	-				-2.4
5,931,611	+				-0.7
5,931,655	+				-1.6
5,931,656	-				-0.2
5,931,680	-				+0.4