Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4211

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,548,039	-				-3.2
5,548,042	-				-2.9
5,548,042	-				-1.9
5,548,042	-				-2.4
5,548,138	-		BT4211	0.14	-1.2
5,548,164	-		BT4211	0.17	-1.9
5,548,287	-		BT4211	0.27	-1.6
5,548,306	-		BT4211	0.29	-2.2
5,548,466	-		BT4211	0.43	+0.4
5,548,539	-		BT4211	0.49	-1.2
5,548,553	-		BT4211	0.50	-0.6
5,548,557	-		BT4211	0.50	-1.6
5,548,717	-		BT4211	0.64	-1.6
5,548,717	-		BT4211	0.64	-1.6
5,549,149	-				-0.6
5,549,240	-				-1.2
5,549,240	-				-1.3
5,549,354	+				-2.4
5,549,397	-				-1.4
5,549,463	-				-1.6
5,549,471	-				+0.4
5,549,471	-				-0.6
5,549,510	+				-0.4
5,549,732	-		BT4212	0.47	+2.0
5,549,814	+		BT4212	0.61	-1.7
5,549,825	-		BT4212	0.63	-0.6
5,549,861	+		BT4212	0.69	+0.8
5,549,870	-		BT4212	0.70	-2.7
5,549,973	+		BT4212	0.88	-0.2
5,549,974	-		BT4212	0.88	-0.2
5,549,974	-		BT4212	0.88	-0.6