Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3981

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,182,305	+		BT3979	0.74	+0.1
5,182,335	-		BT3979	0.80	+0.4
5,182,373	+		BT3979	0.87	-1.6
5,182,398	+				-0.4
5,182,425	-				-1.6
5,182,446	-				-3.5
5,182,446	-				-0.8
5,182,484	-				-0.6
5,182,822	+		BT3980	0.50	-1.9
5,182,824	+		BT3980	0.51	-0.2
5,183,011	-		BT3980	0.75	+0.4
5,183,051	-		BT3980	0.80	-0.2
5,183,215	-				+1.4
5,183,230	-				-1.9
5,183,242	-				-2.0
5,183,265	-				+0.4
5,183,302	-		BT3981	0.14	-3.5
5,183,366	-		BT3981	0.24	-1.6
5,183,416	-		BT3981	0.31	+0.4
5,183,547	-		BT3981	0.50	-0.6
5,183,906	-				+0.4
5,183,932	-				-1.8
5,183,932	-				-1.9
5,183,993	+				-2.0
5,184,107	-				-1.8
5,184,339	-		BT3982	0.25	-0.3
5,184,353	+		BT3982	0.26	-1.5
5,184,402	-		BT3982	0.29	+0.4
5,184,402	-		BT3982	0.29	-0.9
5,184,667	-		BT3982	0.48	-0.9
5,184,706	+		BT3982	0.51	-0.6
5,184,707	-		BT3982	0.51	+0.4
5,184,753	+		BT3982	0.54	-0.6
5,184,754	-		BT3982	0.54	-0.6
5,184,754	-		BT3982	0.54	-1.2
5,184,754	-		BT3982	0.54	-0.7
5,184,797	+		BT3982	0.57	-1.0
5,184,798	-		BT3982	0.57	-0.8
5,184,816	+		BT3982	0.59	-0.9
5,184,819	-		BT3982	0.59	-0.6
5,184,819	-		BT3982	0.59	-1.0
5,184,829	+		BT3982	0.59	-2.4
5,184,876	-		BT3982	0.63	-1.9
5,184,876	-		BT3982	0.63	-1.6
5,184,876	-		BT3982	0.63	-0.5
5,184,876	-		BT3982	0.63	+1.4