Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3933

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,106,956	-				+0.4
5,106,970	-				+0.3
5,107,010	+				-1.2
5,107,038	-				-0.6
5,107,344	+		BT3933	0.40	-4.8
5,107,345	-		BT3933	0.40	-1.9
5,107,345	-		BT3933	0.40	-1.2
5,107,346	+		BT3933	0.40	-1.9
5,107,425	+		BT3933	0.50	-0.2
5,107,480	-		BT3933	0.57	-1.9
5,107,480	-		BT3933	0.57	-4.4
5,107,518	-		BT3933	0.62	-5.2
5,107,588	+		BT3933	0.71	-0.6
5,107,588	+		BT3933	0.71	-0.6
5,107,588	+		BT3933	0.71	-3.3
5,107,589	-		BT3933	0.71	-2.6
5,107,685	+		BT3933	0.84	-0.9
5,107,694	+		BT3933	0.85	+0.4
5,107,694	+		BT3933	0.85	+0.4
5,107,756	+				-5.0
5,107,757	-				-0.6
5,107,798	+				-4.0
5,107,802	-				-6.2
5,107,810	-				-1.2
5,107,813	+				-1.2
5,107,814	-				-2.4
5,107,844	+				-0.9
5,107,844	+				+0.4
5,107,935	-				-1.7
5,107,943	-				-1.3
5,108,037	+				-1.9
5,108,037	+				-2.2
5,108,037	+				-1.9
5,108,037	+				-3.9
5,108,038	-				-1.8
5,108,110	-				-2.4