Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3883

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
5,053,875	+		BT3881	0.79	+0.4
5,053,879	-		BT3881	0.79	-0.4
5,054,122	+				-1.4
5,054,142	+				+1.7
5,054,205	+				-0.9
5,054,232	+				-0.6
5,054,248	+				-2.4
5,054,353	+		BT3882	0.21	+0.1
5,054,399	+		BT3882	0.28	-0.6
5,054,419	+		BT3882	0.31	-1.6
5,054,479	+		BT3882	0.40	+0.4
5,054,589	+		BT3882	0.57	-0.6
5,054,633	+		BT3882	0.63	-1.4
5,054,812	+				-1.9
5,054,873	+				-1.6
5,054,873	+				-0.2
5,054,902	+				-2.2
5,054,931	+				-1.9
5,054,943	+		BT3883	0.11	-1.9
5,055,053	+		BT3883	0.29	-1.2
5,055,053	+		BT3883	0.29	-1.9
5,055,244	+		BT3883	0.60	-0.9
5,055,478	+				-0.3
5,055,478	+				-1.5
5,055,482	+				-2.2
5,055,482	+				-1.6
5,055,482	+				-0.6
5,055,496	+				-1.4
5,055,503	+				-1.2
5,055,528	+				-1.9
5,055,995	+				+1.4
5,056,019	+				-1.2
5,056,020	-				-0.0
5,056,020	-				-1.0
5,056,038	+				+5.1
5,056,038	+				-0.4
5,056,042	+				-0.5
5,056,042	+				-1.3
5,056,043	-				-0.4
5,056,045	+				-0.2
5,056,065	+				-1.5
5,056,145	-				-1.7
5,056,184	+		BT3885	0.14	-1.4
5,056,185	-		BT3885	0.14	+0.4
5,056,223	-		BT3885	0.18	+1.1
5,056,231	-		BT3885	0.18	-0.0
5,056,257	+		BT3885	0.21	-1.2
5,056,373	-		BT3885	0.32	-2.8
5,056,402	-		BT3885	0.35	-0.6
5,056,403	+		BT3885	0.35	-0.3
5,056,403	+		BT3885	0.35	-0.9
5,056,404	-		BT3885	0.36	-1.2
5,056,469	+		BT3885	0.42	-1.0