Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3253

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,152,170	-				-2.7
4,152,705	-		BT3253	0.42	+0.4
4,152,907	-		BT3253	0.58	-0.6
4,152,907	-		BT3253	0.58	-1.2
4,153,238	-		BT3253	0.84	-4.3
4,153,238	-		BT3253	0.84	-2.4
4,153,508	-				-0.7
4,153,508	-				-1.3
4,153,510	-				-1.3
4,153,560	-				-1.2
4,153,578	-				+0.4
4,153,604	-				+0.4
4,153,632	-				-1.2
4,153,632	-				-1.5
4,153,857	-		BT3254	0.16	-0.6
4,153,938	-		BT3254	0.19	+1.0
4,153,942	-		BT3254	0.19	-1.2
4,154,075	-		BT3254	0.26	-1.2
4,154,075	-		BT3254	0.26	+0.4
4,154,095	-		BT3254	0.26	+0.4
4,154,095	-		BT3254	0.26	-0.6
4,154,095	-		BT3254	0.26	-1.1
4,154,095	-		BT3254	0.26	-0.6
4,154,099	-		BT3254	0.27	-1.2
4,154,099	-		BT3254	0.27	-0.6
4,154,224	-		BT3254	0.32	+1.4
4,154,229	-		BT3254	0.33	-2.2
4,154,258	-		BT3254	0.34	+1.0
4,154,296	-		BT3254	0.36	-1.8