Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3184

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
4,071,744	-				-0.9
4,071,747	+				-1.5
4,071,773	-				-0.6
4,071,786	-				-0.6
4,071,786	-				-1.9
4,071,792	+				-1.2
4,071,798	+				-1.1
4,071,804	+				-1.3
4,071,813	+				+0.4
4,071,814	-				-2.4
4,071,870	+		BT3182	0.12	-1.2
4,071,870	+		BT3182	0.12	-1.0
4,071,870	+		BT3182	0.12	-1.4
4,071,871	-		BT3182	0.12	+0.1
4,071,871	-		BT3182	0.12	-0.2
4,072,002	+		BT3182	0.35	-1.6
4,072,002	+		BT3182	0.35	+0.4
4,072,002	+		BT3182	0.35	-3.0
4,072,002	+		BT3182	0.35	-3.4
4,072,003	-		BT3182	0.35	+0.8
4,072,003	-		BT3182	0.35	-0.6
4,072,007	+		BT3182	0.36	-1.9
4,072,014	+		BT3182	0.37	+0.4
4,072,044	+		BT3182	0.42	-1.4
4,072,044	+		BT3182	0.42	-1.1
4,072,047	+		BT3182	0.43	+0.4
4,072,048	-		BT3182	0.43	-1.2
4,072,048	-		BT3182	0.43	+0.4
4,072,158	+		BT3182	0.62	-0.8
4,072,162	+		BT3182	0.63	-1.6
4,072,241	+		BT3182	0.76	-1.1
4,072,241	+		BT3182	0.76	+0.4
4,072,241	+		BT3182	0.76	-1.1
4,072,289	-		BT3182	0.85	-0.6
4,072,291	-		BT3182	0.85	-0.8
4,072,349	-				-2.4
4,072,375	+				+2.0
4,072,376	-				-0.8
4,072,381	+				-0.9
4,072,382	-				-0.7
4,072,382	-				-2.9
4,072,395	+				+0.0
4,072,396	-				-0.8
4,072,402	+				-0.6
4,072,420	-				-2.6
4,072,420	-				-1.4
4,072,470	+				-1.2
4,072,471	-				-1.0
4,072,471	-				-1.2
4,072,506	+		BT3183	0.17	-0.3
4,072,521	+		BT3183	0.23	-1.2
4,072,522	-		BT3183	0.23	-1.6
4,072,550	+		BT3183	0.33	-1.2
4,072,550	+		BT3183	0.33	-2.4
4,072,551	-		BT3183	0.34	-0.2
4,072,551	-		BT3183	0.34	-1.2
4,072,556	+		BT3183	0.36	+0.0
4,072,556	+		BT3183	0.36	-0.6
4,072,556	+		BT3183	0.36	-1.2
4,072,580	+		BT3183	0.44	+0.4
4,072,611	-		BT3183	0.56	-1.3
4,072,662	+		BT3183	0.74	-1.6
4,072,671	-		BT3183	0.78	-2.0
4,072,681	+		BT3183	0.81	+0.4
4,072,682	-		BT3183	0.82	-0.6
4,072,707	+				-2.2
4,072,707	-				-1.2
4,072,708	-				-1.6
4,072,711	+				+0.4
4,072,712	-				-2.2
4,072,716	+				-1.6
4,072,717	-				-3.0
4,072,763	+				-3.8
4,072,763	+				-3.0
4,072,763	+				-1.6
4,072,766	-				-4.2
4,072,766	-				-3.8
4,072,816	+				-2.6
4,072,821	+				-1.2
4,072,821	+				-1.7
4,072,863	+				-3.4
4,072,952	+		BT3184	0.14	-2.4
4,072,956	+		BT3184	0.14	-2.9
4,072,956	+		BT3184	0.14	-0.6
4,072,956	+		BT3184	0.14	-2.7
4,072,956	+		BT3184	0.14	-2.4
4,072,956	+		BT3184	0.14	-3.9
4,072,957	-		BT3184	0.14	-0.6
4,072,960	+		BT3184	0.14	-2.7
4,072,960	+		BT3184	0.14	-1.7
4,072,960	+		BT3184	0.14	-2.4
4,072,961	-		BT3184	0.14	-4.0
4,072,961	-		BT3184	0.14	-2.8
4,072,961	-		BT3184	0.14	-2.1
4,072,961	-		BT3184	0.14	-4.8
4,072,961	-		BT3184	0.14	-1.3
4,072,961	-		BT3184	0.14	-5.5
4,072,965	-		BT3184	0.15	-3.1
4,072,965	-		BT3184	0.15	-4.7
4,073,008	-		BT3184	0.17	-3.6
4,073,008	-		BT3184	0.17	-3.0
4,073,072	-		BT3184	0.22	-3.5
4,073,094	-		BT3184	0.23	-2.6
4,073,117	-		BT3184	0.24	-1.2
4,073,119	-		BT3184	0.24	-1.2
4,073,197	+		BT3184	0.29	-2.0
4,073,255	-		BT3184	0.33	-1.9
4,073,282	-		BT3184	0.35	-1.2
4,073,324	-		BT3184	0.38	-2.2
4,073,381	-		BT3184	0.41	-2.7
4,073,381	-		BT3184	0.41	-3.9
4,073,468	-		BT3184	0.47	-2.2
4,073,505	-		BT3184	0.49	-4.4
4,073,565	+		BT3184	0.53	-1.2
4,073,566	+		BT3184	0.53	-4.3
4,073,566	+		BT3184	0.53	-1.6
4,073,612	+		BT3184	0.56	-0.6
4,073,627	-		BT3184	0.57	-2.4
4,073,691	+		BT3184	0.61	-0.9
4,073,709	-		BT3184	0.62	-2.4
4,073,728	+		BT3184	0.63	-3.4
4,073,729	-		BT3184	0.63	-2.6
4,073,729	-		BT3184	0.63	-1.6
4,073,732	+		BT3184	0.63	-2.4
4,073,732	+		BT3184	0.63	-0.6
4,073,732	+		BT3184	0.63	-2.4
4,073,732	+		BT3184	0.63	-2.7
4,073,732	+		BT3184	0.63	-3.8
4,073,732	+		BT3184	0.63	-0.6
4,073,764	+		BT3184	0.66	-5.5
4,073,833	-		BT3184	0.70	-4.4
4,073,924	+		BT3184	0.76	-1.6
4,073,925	-		BT3184	0.76	-1.8
4,073,931	-		BT3184	0.76	-3.7
4,074,131	+		BT3184	0.89	-4.9
4,074,182	+				-2.9
4,074,182	+				-2.4
4,074,183	-				-3.5
4,074,183	-				-2.4
4,074,213	-				-2.7
4,074,301	-				-2.7
4,074,340	+				-0.2
4,074,477	+		BT3185	0.16	-0.3
4,074,507	-		BT3185	0.24	-1.0
4,074,546	+		BT3185	0.34	-0.7
4,074,562	+		BT3185	0.38	-1.2
4,074,563	-		BT3185	0.38	-1.5
4,074,575	+		BT3185	0.41	-1.2
4,074,643	+		BT3185	0.58	-0.6
4,074,643	+		BT3185	0.58	-1.4
4,074,643	+		BT3185	0.58	-0.2
4,074,662	-		BT3185	0.63	-1.1
4,074,710	+		BT3185	0.75	-0.2
4,074,814	-				-1.0
4,074,819	+				-0.6
4,074,827	-				-0.8
4,074,864	+				-2.0
4,074,864	+				-1.2
4,074,864	+				-1.9
4,074,865	-				-2.0
4,074,865	-				-0.9
4,074,865	-				-1.4
4,074,902	+				-1.4
4,074,921	+				-0.4
4,074,992	-		BT3186	0.13	-0.5
4,075,098	-		BT3186	0.21	-1.2
4,075,164	-		BT3186	0.26	+0.4
4,075,167	+		BT3186	0.26	-0.9
4,075,168	-		BT3186	0.26	-1.0
4,075,199	-		BT3186	0.28	-1.4