Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3073

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,896,157	-		BT3072	0.34	-2.1
3,896,188	+		BT3072	0.37	-0.6
3,896,204	+		BT3072	0.38	-1.1
3,896,213	-		BT3072	0.39	-1.1
3,896,213	-		BT3072	0.39	+0.4
3,896,391	-		BT3072	0.53	-0.9
3,896,391	-		BT3072	0.53	-0.6
3,896,438	-		BT3072	0.56	-2.4
3,896,519	+		BT3072	0.63	+0.4
3,896,520	-		BT3072	0.63	-0.6
3,896,543	-		BT3072	0.64	-2.4
3,896,683	+		BT3072	0.75	-2.1
3,896,774	+		BT3072	0.82	-1.6
3,896,780	-		BT3072	0.83	-3.9
3,896,783	+		BT3072	0.83	-1.1
3,896,790	-		BT3072	0.84	-0.9
3,896,839	-		BT3072	0.87	+0.4
3,897,145	-				-1.9
3,897,145	-				-2.1
3,897,151	+				-1.6
3,897,153	+				-0.5
3,897,153	+				-2.7
3,897,153	+				-1.3
3,897,153	+				-3.0
3,897,172	+				-3.0
3,897,172	+				-0.6
3,897,249	+		BT3073	0.11	-2.2
3,897,249	+		BT3073	0.11	-1.6
3,897,249	+		BT3073	0.11	+0.4
3,897,250	-		BT3073	0.11	-1.6
3,897,252	-		BT3073	0.12	-0.6
3,897,354	-		BT3073	0.22	-3.7
3,897,359	-		BT3073	0.22	+2.0
3,897,454	-		BT3073	0.32	+0.4
3,897,541	-		BT3073	0.41	-1.6
3,897,564	+		BT3073	0.43	-1.6
3,897,584	-		BT3073	0.45	-2.6
3,897,613	-		BT3073	0.48	-0.7
3,897,669	-		BT3073	0.54	-0.9
3,897,669	-		BT3073	0.54	-1.6
3,897,733	+		BT3073	0.60	-0.9
3,897,734	-		BT3073	0.60	-2.1
3,897,734	-		BT3073	0.60	-1.9
3,897,919	-		BT3073	0.79	-1.1
3,898,042	+				-1.1
3,898,134	-				-1.6
3,898,138	-				-1.6
3,898,188	-				+0.4
3,898,248	-		BT3074	0.12	-1.6
3,898,249	+		BT3074	0.12	-1.1
3,898,250	-		BT3074	0.12	+0.4
3,898,274	+		BT3074	0.15	-1.6
3,898,323	+		BT3074	0.20	-1.7
3,898,330	-		BT3074	0.20	-2.8
3,898,450	+		BT3074	0.33	-1.6
3,898,451	-		BT3074	0.33	+0.4
3,898,577	+		BT3074	0.46	+0.4
3,898,578	-		BT3074	0.46	+0.4
3,898,581	+		BT3074	0.46	+0.4
3,898,601	-		BT3074	0.49	-2.1
3,898,639	-		BT3074	0.52	+0.4
3,898,677	-		BT3074	0.56	+0.4
3,898,743	+		BT3074	0.63	-1.1
3,898,743	+		BT3074	0.63	-1.1
3,898,764	+		BT3074	0.65	-0.6
3,898,779	+		BT3074	0.67	+0.4
3,899,025	-				-0.6
3,899,036	-				-0.6
3,899,083	+				-1.6
3,899,084	-				+0.4