Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2954

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,720,128	+				-1.6
3,720,218	-		BT2953	0.12	-1.1
3,720,218	-		BT2953	0.12	-2.2
3,720,269	-		BT2953	0.18	-1.1
3,720,288	+		BT2953	0.19	+0.4
3,720,295	+		BT2953	0.20	-1.9
3,720,306	+		BT2953	0.21	+1.4
3,720,315	-		BT2953	0.22	-2.4
3,720,335	+		BT2953	0.24	-0.1
3,720,354	-		BT2953	0.26	+0.1
3,720,400	+		BT2953	0.31	-1.6
3,720,418	+		BT2953	0.32	+1.0
3,720,446	+		BT2953	0.35	+1.0
3,720,470	-		BT2953	0.38	-1.3
3,720,538	+		BT2953	0.44	+0.4
3,720,539	-		BT2953	0.44	-2.6
3,720,539	-		BT2953	0.44	-0.1
3,720,572	+		BT2953	0.48	-0.9
3,720,631	+		BT2953	0.53	-1.2
3,720,632	-		BT2953	0.54	-1.4
3,720,651	-		BT2953	0.55	-1.0
3,720,712	+		BT2953	0.62	-1.7
3,720,772	+		BT2953	0.67	-1.6
3,720,787	+		BT2953	0.69	-1.0
3,720,836	+		BT2953	0.74	-0.9
3,720,836	+		BT2953	0.74	-1.2
3,720,839	+		BT2953	0.74	-1.6
3,720,839	+		BT2953	0.74	-1.6
3,720,906	+		BT2953	0.81	-1.9
3,720,906	+		BT2953	0.81	-0.9
3,720,908	+		BT2953	0.81	-1.4
3,720,908	+		BT2953	0.81	-1.9
3,720,908	+		BT2953	0.81	-0.8
3,720,908	+		BT2953	0.81	+0.4
3,720,909	-		BT2953	0.81	-0.6
3,720,909	-		BT2953	0.81	-1.9
3,720,909	-		BT2953	0.81	-1.1
3,720,909	-		BT2953	0.81	-1.2
3,720,909	-		BT2953	0.81	+0.4
3,720,928	+		BT2953	0.83	-1.0
3,720,928	+		BT2953	0.83	-0.7
3,720,934	+		BT2953	0.84	-1.0
3,721,084	+				-0.6
3,721,085	-				-1.8
3,721,085	-				-1.1
3,721,099	+				-1.4
3,721,100	-				+0.4
3,721,100	-				-1.0
3,721,138	-				-0.6
3,721,218	+		BT2954	0.26	-1.4
3,721,227	+		BT2954	0.28	-1.9
3,721,281	+		BT2954	0.41	+0.4
3,721,282	+		BT2954	0.41	-1.6
3,721,282	+		BT2954	0.41	-2.1
3,721,283	-		BT2954	0.41	+0.4
3,721,283	-		BT2954	0.41	-1.1
3,721,301	+		BT2954	0.46	-1.9
3,721,305	+		BT2954	0.46	-1.3
3,721,316	-		BT2954	0.49	-2.7
3,721,374	+		BT2954	0.63	-1.4
3,721,380	+		BT2954	0.64	+0.4
3,721,380	+		BT2954	0.64	-2.9
3,721,381	-		BT2954	0.64	-2.4
3,721,453	+		BT2954	0.81	-0.6
3,721,458	+		BT2954	0.82	+0.4
3,721,459	-		BT2954	0.83	+0.0
3,721,555	+				-2.1
3,721,585	+				-0.1
3,721,585	-				-0.9
3,721,690	+				-3.5
3,721,691	-				-0.9
3,721,691	-				-0.6
3,721,691	-				-1.2
3,721,707	+				-1.0
3,721,707	+				-0.6
3,721,708	-				-1.9
3,721,719	+				-1.1
3,721,768	+				-0.9
3,721,768	+				-1.1
3,721,769	-				-0.4
3,721,769	-				+0.1
3,721,798	-		BT2955	0.11	+1.7
3,721,857	+		BT2955	0.14	-1.9
3,721,858	-		BT2955	0.14	-0.3
3,721,927	-		BT2955	0.17	+1.6
3,721,986	+		BT2955	0.20	-1.3
3,721,986	+		BT2955	0.20	-1.9
3,722,050	+		BT2955	0.23	-0.6
3,722,051	-		BT2955	0.23	-1.2
3,722,147	-		BT2955	0.27	-0.6
3,722,297	+		BT2955	0.34	-0.8
3,722,297	+		BT2955	0.34	-1.3
3,722,297	+		BT2955	0.34	-1.2
3,722,363	-		BT2955	0.37	-2.1
3,722,365	+		BT2955	0.37	+0.4
3,722,385	-		BT2955	0.38	-2.0
3,722,513	+		BT2955	0.44	-0.8
3,722,519	-		BT2955	0.45	-1.6