Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2445

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
3,062,097	+		BT2444	0.55	-1.1
3,062,097	+		BT2444	0.55	+0.5
3,062,098	-		BT2444	0.55	-0.9
3,062,132	+		BT2444	0.58	-2.0
3,062,133	-		BT2444	0.58	-0.5
3,062,195	-		BT2444	0.63	+0.1
3,062,233	+		BT2444	0.66	-1.2
3,062,233	+		BT2444	0.66	+0.2
3,062,236	+		BT2444	0.66	-1.1
3,062,236	+		BT2444	0.66	-2.1
3,062,237	-		BT2444	0.66	-1.0
3,062,237	-		BT2444	0.66	+0.5
3,062,287	-		BT2444	0.70	+0.5
3,062,289	+		BT2444	0.70	-0.9
3,062,296	-		BT2444	0.70	-0.3
3,062,336	-		BT2444	0.73	+0.5
3,062,338	-		BT2444	0.74	-2.5
3,062,371	+		BT2444	0.76	-1.9
3,062,371	+		BT2444	0.76	-2.5
3,062,384	-		BT2444	0.77	-0.5
3,062,416	+		BT2444	0.80	-2.7
3,062,443	-		BT2444	0.82	-0.5
3,062,468	+		BT2444	0.83	-1.7
3,062,470	+		BT2444	0.84	-0.7
3,062,470	+		BT2444	0.84	-2.5
3,062,475	+		BT2444	0.84	-0.4
3,062,476	-		BT2444	0.84	+1.0
3,062,482	+		BT2444	0.85	+1.5
3,062,516	-		BT2444	0.87	-0.8
3,062,526	+		BT2444	0.88	-0.5
3,062,528	-		BT2444	0.88	-1.9
3,062,544	+		BT2444	0.89	-1.7
3,062,635	+				-0.6
3,062,636	-				-0.5
3,062,636	-				-1.0
3,062,642	+				-2.4
3,062,642	+				-2.9
3,062,711	-				-0.5
3,062,715	-				-1.0
3,062,775	+				-0.1
3,062,782	+				-0.3
3,062,782	+				+0.5
3,062,783	-				+2.0
3,063,024	+				-1.1
3,063,092	-				-1.4
3,063,153	+		BT2445	0.16	-1.5
3,063,192	+		BT2445	0.25	-1.1
3,063,192	+		BT2445	0.25	-1.1
3,063,243	-		BT2445	0.37	-1.1
3,063,243	-		BT2445	0.37	-1.1
3,063,246	-		BT2445	0.37	-1.9
3,063,246	-		BT2445	0.37	-0.8
3,063,256	-		BT2445	0.40	-0.5
3,063,276	+		BT2445	0.44	-0.4
3,063,279	-		BT2445	0.45	-0.5
3,063,283	+		BT2445	0.46	-1.5
3,063,322	-		BT2445	0.55	+0.5
3,063,343	+		BT2445	0.60	-1.1
3,063,344	-		BT2445	0.60	-0.5
3,063,369	-		BT2445	0.66	-1.1
3,063,452	+		BT2445	0.84	-1.1
3,063,470	-		BT2445	0.89	-0.8
3,063,588	+				-0.7
3,064,074	-		BT2446	0.41	-0.9
3,064,353	-		BT2446	0.64	-0.1
3,064,366	-		BT2446	0.65	-2.7
3,064,366	-		BT2446	0.65	+0.5
3,064,369	+		BT2446	0.65	-0.1
3,064,369	+		BT2446	0.65	-0.1
3,064,369	+		BT2446	0.65	-1.3
3,064,370	-		BT2446	0.65	-1.1
3,064,370	-		BT2446	0.65	+1.5
3,064,442	+		BT2446	0.71	+0.5