Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2326

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,902,332	+		BT2324	0.77	-0.9
2,902,400	+		BT2324	0.81	+0.4
2,902,442	+		BT2324	0.83	-0.8
2,902,450	+		BT2324	0.83	+1.4
2,902,451	-		BT2324	0.83	-0.9
2,902,451	-		BT2324	0.83	+1.4
2,902,451	-		BT2324	0.83	-1.9
2,902,732	-				+0.4
2,902,743	+				-0.6
2,902,743	+				-1.1
2,902,744	-				-1.0
2,902,749	-				-1.6
2,902,749	-				-0.9
2,902,805	-				-1.3
2,902,828	-				+0.4
2,902,843	-				-1.6
2,902,856	+				-0.9
2,902,900	+		BT2325	0.12	-1.2
2,902,905	+		BT2325	0.13	+0.0
2,902,905	+		BT2325	0.13	-1.2
2,902,906	-		BT2325	0.13	-1.3
2,902,906	-		BT2325	0.13	-0.8
2,902,906	-		BT2325	0.13	-0.6
2,903,284	+				-1.3
2,903,310	+				-0.7
2,903,313	+				-0.8
2,903,338	-				-0.6
2,903,338	-				-1.6
2,903,339	+				-0.8
2,903,339	+				-1.2
2,903,409	-				-0.6
2,903,477	+				-2.2
2,903,570	-				+0.4
2,903,921	+		BT2326	0.11	-0.6
2,903,922	-		BT2326	0.11	-0.4
2,903,922	-		BT2326	0.11	-0.6
2,903,990	-		BT2326	0.12	-1.3
2,904,225	+		BT2326	0.16	-0.6
2,904,226	-		BT2326	0.16	+0.0
2,904,301	-		BT2326	0.17	-0.6
2,904,319	-		BT2326	0.18	+1.2
2,904,998	+		BT2326	0.30	-0.4
2,904,998	+		BT2326	0.30	-0.5
2,905,003	+		BT2326	0.30	-0.3
2,905,094	+		BT2326	0.31	+0.0
2,905,105	+		BT2326	0.31	-2.6
2,905,105	+		BT2326	0.31	-1.6
2,905,118	-		BT2326	0.32	-0.6
2,905,265	+		BT2326	0.34	+1.2
2,905,265	+		BT2326	0.34	+0.4
2,905,357	-		BT2326	0.36	+0.0
2,905,421	-		BT2326	0.37	-0.5
2,905,486	+		BT2326	0.38	-1.0
2,905,487	-		BT2326	0.38	-2.2
2,905,507	+		BT2326	0.39	+0.4
2,905,771	+		BT2326	0.43	-1.4
2,905,908	-		BT2326	0.46	-1.9
2,906,053	+		BT2326	0.48	-0.8
2,906,152	+		BT2326	0.50	+0.2
2,907,201	-		BT2326	0.68	+0.4
2,907,407	-		BT2326	0.72	-0.6
2,907,407	-		BT2326	0.72	-0.6
2,907,414	+		BT2326	0.72	-0.6
2,907,430	-		BT2326	0.72	-1.6
2,907,545	+		BT2326	0.74	-0.2
2,907,546	-		BT2326	0.74	-0.3
2,907,805	+		BT2326	0.79	-0.4
2,907,832	+		BT2326	0.79	+0.4
2,907,833	-		BT2326	0.79	-0.2
2,907,833	-		BT2326	0.79	-0.2
2,907,850	+		BT2326	0.79	-1.2
2,907,941	+		BT2326	0.81	+1.4
2,907,942	-		BT2326	0.81	-3.6
2,907,956	-		BT2326	0.81	-1.0
2,908,161	+		BT2326	0.85	-1.1
2,908,408	+		BT2326	0.89	-0.6
2,908,414	+		BT2326	0.89	+0.4
2,908,504	+				-0.6
2,908,825	+				+1.4
2,908,826	-				-2.9
2,909,027	-				-1.0
2,909,098	+				-0.4
2,909,098	+				-0.6
2,909,099	-				+0.4
2,909,100	+				+0.4
2,909,101	-				+0.0
2,909,103	+				-1.2
2,909,105	+				-0.7
2,909,184	+				-1.0
2,909,193	+				-1.2
2,909,310	-				+0.4
2,909,310	-				-2.0
2,909,324	-				-1.3
2,909,324	-				-1.6
2,909,325	+				-0.6
2,909,326	-				-0.2
2,909,326	-				+0.4
2,909,328	-				-1.2
2,909,328	-				-1.6
2,909,343	-				-0.9
2,909,343	-				-0.9
2,909,343	-				-1.1
2,909,380	+		BT2327	0.15	-0.4
2,909,381	-		BT2327	0.16	-2.6
2,909,399	-		BT2327	0.20	-1.1
2,909,418	+		BT2327	0.24	-1.5
2,909,420	+		BT2327	0.24	-0.6
2,909,427	+		BT2327	0.26	-1.2
2,909,433	+		BT2327	0.27	-0.2
2,909,433	+		BT2327	0.27	-0.6
2,909,435	+		BT2327	0.27	-0.2
2,909,435	+		BT2327	0.27	-0.9
2,909,441	+		BT2327	0.29	-0.6
2,909,442	-		BT2327	0.29	+0.4
2,909,474	+		BT2327	0.36	-1.6
2,909,487	+		BT2327	0.38	-0.3
2,909,490	+		BT2327	0.39	-1.1
2,909,490	+		BT2327	0.39	-1.7
2,909,517	+		BT2327	0.45	-1.7
2,909,524	+		BT2327	0.46	-2.2
2,909,525	-		BT2327	0.47	+0.0
2,909,533	+		BT2327	0.48	-0.5
2,909,585	+		BT2327	0.60	-1.6
2,909,601	+		BT2327	0.63	-0.3
2,909,605	-		BT2327	0.64	-0.4
2,909,614	+		BT2327	0.66	+0.0
2,909,615	-		BT2327	0.66	-1.2
2,909,634	-		BT2327	0.70	-0.8
2,909,637	-		BT2327	0.71	-2.0
2,909,637	-		BT2327	0.71	+0.4
2,909,679	+		BT2327	0.80	-1.1
2,909,688	-		BT2327	0.82	-0.3
2,909,718	+		BT2327	0.88	+0.4
2,909,719	-		BT2327	0.88	-1.9
2,909,827	+				-1.4
2,909,839	+				-2.4
2,909,938	+		BT2328	0.15	-1.4
2,909,940	+		BT2328	0.15	-0.6