Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2146

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,701,699	+		BT2145	0.66	-1.6
2,701,700	-		BT2145	0.66	-1.1
2,701,700	-		BT2145	0.66	-0.3
2,701,702	+		BT2145	0.66	+0.4
2,701,703	-		BT2145	0.66	-0.9
2,701,724	+		BT2145	0.67	-2.4
2,701,725	-		BT2145	0.67	-1.8
2,701,841	-		BT2145	0.72	+0.4
2,701,844	+		BT2145	0.72	-0.6
2,701,875	+		BT2145	0.73	-1.4
2,701,880	+		BT2145	0.73	-0.9
2,701,883	-		BT2145	0.74	-0.2
2,702,053	+		BT2145	0.81	-0.6
2,702,068	+		BT2145	0.81	-1.2
2,702,069	-		BT2145	0.81	-0.6
2,702,106	+		BT2145	0.83	+2.7
2,702,139	+		BT2145	0.84	+0.8
2,702,140	-		BT2145	0.84	-1.2
2,702,140	-		BT2145	0.84	-0.6
2,702,142	+		BT2145	0.84	+0.8
2,702,142	+		BT2145	0.84	+2.0
2,702,154	-		BT2145	0.85	+1.4
2,702,196	+		BT2145	0.87	-0.6
2,702,395	+				-1.6
2,702,395	+				-1.6
2,702,395	+				-1.4
2,702,512	+				-1.6
2,702,524	+				-1.7
2,702,533	+				-1.8
2,702,533	+				-1.6
2,702,538	+				+0.4
2,702,587	-				-2.0
2,702,604	-				+0.4
2,702,639	-				-1.6
2,702,643	+				-1.6
2,702,643	+				-1.9
2,702,644	-				+1.4
2,702,644	-				-0.3
2,702,645	+				+1.4
2,702,646	-				+0.4
2,702,749	+				-0.9
2,702,749	+				+1.4
2,702,751	+				+1.7
2,702,751	+				-1.2
2,702,751	+				+0.4
2,702,806	-				-1.2
2,702,886	-				-1.8
2,702,902	-				-0.6
2,702,943	+		BT2146	0.11	-1.0
2,702,946	+		BT2146	0.11	-1.3
2,702,978	-		BT2146	0.12	+0.4
2,702,978	-		BT2146	0.12	+0.4
2,703,218	+		BT2146	0.21	-0.0
2,703,264	+		BT2146	0.23	-0.9
2,703,319	-		BT2146	0.25	-0.5
2,703,325	-		BT2146	0.25	+0.8
2,703,325	-		BT2146	0.25	-1.2
2,703,356	+		BT2146	0.26	-1.2
2,703,358	+		BT2146	0.27	-0.6
2,703,446	-		BT2146	0.30	+1.4
2,703,466	+		BT2146	0.31	-0.9
2,703,466	+		BT2146	0.31	+0.4
2,703,488	+		BT2146	0.31	-1.6
2,703,525	+		BT2146	0.33	-0.2
2,703,527	+		BT2146	0.33	-0.2
2,703,528	-		BT2146	0.33	-0.5
2,703,528	-		BT2146	0.33	-1.7
2,703,530	+		BT2146	0.33	-2.0
2,703,530	+		BT2146	0.33	-0.6
2,703,533	+		BT2146	0.33	-0.9
2,703,571	+		BT2146	0.34	+0.4
2,703,572	-		BT2146	0.35	-0.3
2,703,572	-		BT2146	0.35	-2.2
2,703,801	+		BT2146	0.43	-1.1
2,703,860	+		BT2146	0.45	-2.4
2,703,860	+		BT2146	0.45	+2.0
2,703,861	-		BT2146	0.45	+0.4
2,703,930	+		BT2146	0.48	-0.6
2,703,931	-		BT2146	0.48	-0.0
2,703,931	-		BT2146	0.48	+0.4
2,703,931	-		BT2146	0.48	-1.2
2,703,976	-		BT2146	0.50	+0.4
2,704,011	-		BT2146	0.51	-0.8
2,704,016	+		BT2146	0.51	-0.5
2,704,140	+		BT2146	0.56	-0.4
2,704,209	+		BT2146	0.58	-0.6
2,704,209	+		BT2146	0.58	+0.4
2,704,210	-		BT2146	0.58	-0.0
2,704,210	-		BT2146	0.58	-1.2
2,704,253	+		BT2146	0.60	-0.5
2,704,377	+		BT2146	0.65	+6.0
2,704,378	-		BT2146	0.65	+1.0
2,704,565	-		BT2146	0.72	-1.1
2,704,566	+		BT2146	0.72	-1.8
2,704,566	+		BT2146	0.72	-0.4
2,704,566	+		BT2146	0.72	+0.4
2,704,566	+		BT2146	0.72	+0.4
2,704,711	-		BT2146	0.77	+0.4
2,704,714	-		BT2146	0.77	-1.6
2,704,714	-		BT2146	0.77	-1.2
2,704,752	-		BT2146	0.79	-0.8
2,704,787	+		BT2146	0.80	-1.1
2,704,788	-		BT2146	0.80	-1.5
2,704,788	-		BT2146	0.80	-0.6
2,704,811	+		BT2146	0.81	+1.4
2,704,961	+		BT2146	0.86	+0.4
2,704,962	-		BT2146	0.86	-0.6
2,704,962	-		BT2146	0.86	-1.1
2,705,016	+		BT2146	0.88	-0.8
2,705,121	-				-1.6
2,705,285	-				-1.2
2,705,325	+				+1.4
2,705,329	+				-1.2
2,705,335	+				-1.9
2,705,373	+				-1.6
2,705,374	-				-0.3
2,705,471	-				-0.2
2,705,471	-				+0.4
2,705,563	+				-2.2
2,705,581	-				-0.7
2,705,599	+				-1.2
2,705,729	+		BT2147	0.19	-0.7
2,705,730	-		BT2147	0.19	-1.4
2,705,760	+		BT2147	0.22	-1.2
2,705,773	+		BT2147	0.23	-1.0
2,705,866	-		BT2147	0.32	-0.2
2,705,985	+		BT2147	0.44	+1.0
2,706,065	+		BT2147	0.52	-1.9
2,706,066	-		BT2147	0.52	-1.2
2,706,067	+		BT2147	0.52	-0.6
2,706,068	-		BT2147	0.52	-0.1
2,706,098	+		BT2147	0.55	+0.4
2,706,166	+		BT2147	0.62	-0.4
2,706,203	+		BT2147	0.65	-1.9
2,706,255	+		BT2147	0.71	+0.4
2,706,292	+		BT2147	0.74	-1.3
2,706,298	+		BT2147	0.75	-1.2
2,706,299	-		BT2147	0.75	-0.2