Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1843

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,313,783	-		BT1842	0.33	-0.6
2,313,788	+		BT1842	0.33	-0.6
2,313,788	+		BT1842	0.33	+0.0
2,313,791	-		BT1842	0.34	-0.6
2,313,800	+		BT1842	0.34	-1.6
2,313,800	+		BT1842	0.34	+1.4
2,313,866	+		BT1842	0.39	-1.2
2,313,895	-		BT1842	0.42	-2.4
2,313,936	-		BT1842	0.45	-1.3
2,313,943	-		BT1842	0.45	-1.4
2,313,960	+		BT1842	0.46	-0.6
2,313,979	+		BT1842	0.48	-0.6
2,313,979	+		BT1842	0.48	-0.4
2,314,067	+		BT1842	0.55	-0.2
2,314,108	+		BT1842	0.58	-0.6
2,314,201	+		BT1842	0.65	-1.6
2,314,204	+		BT1842	0.65	+1.1
2,314,304	-		BT1842	0.73	-0.6
2,314,357	+				+0.4
2,314,361	+		BT1842	0.77	-0.6
2,314,361	+		BT1842	0.77	-0.6
2,314,395	-		BT1842	0.79	-1.6
2,314,441	+		BT1842	0.83	-0.5
2,314,463	+		BT1842	0.85	-0.2
2,314,501	+		BT1842	0.88	-1.2
2,314,532	+		BT1842	0.90	-2.1
2,314,629	+				-2.4
2,314,629	+				+1.3
2,314,632	+				-1.0
2,314,633	-				-1.6
2,314,636	-				-0.2
2,314,636	-				-4.9
2,314,636	-				-0.7
2,314,675	-				-0.6
2,314,678	+				-0.6
2,314,740	-				-0.1
2,314,745	-				+1.4
2,314,745	-				+0.2
2,314,746	+				-1.2
2,314,762	+				-0.2
2,314,793	+				+0.4
2,314,796	-				-2.2
2,314,796	-				-1.1
2,314,879	+				-0.9
2,314,879	+				-3.5
2,314,929	-		BT1843	0.12	-1.6
2,314,957	+		BT1843	0.14	+0.4
2,314,957	+		BT1843	0.14	-2.4
2,314,959	+		BT1843	0.14	-3.2
2,314,959	+		BT1843	0.14	-1.2
2,314,960	-		BT1843	0.14	-3.9
2,315,017	-		BT1843	0.18	+0.4
2,315,023	+		BT1843	0.19	+0.4
2,315,023	+		BT1843	0.19	-0.6
2,315,045	+		BT1843	0.21	-0.6
2,315,101	-		BT1843	0.25	-0.6
2,315,101	-		BT1843	0.25	+0.4
2,315,189	+		BT1843	0.32	-2.2
2,315,245	-		BT1843	0.36	-2.7
2,315,302	-		BT1843	0.41	-1.6
2,315,349	-		BT1843	0.45	-2.6
2,315,486	+		BT1843	0.55	-4.4
2,315,524	+		BT1843	0.58	-4.1
2,315,649	-		BT1843	0.68	-2.2
2,315,705	-		BT1843	0.73	-4.1
2,315,901	+		BT1843	0.88	-3.2
2,315,901	+		BT1843	0.88	-2.4
2,315,901	+		BT1843	0.88	+0.4
2,315,905	+		BT1843	0.88	-3.8
2,315,930	+				-0.6
2,315,930	+				-1.6
2,315,930	+				-0.6
2,315,931	-				-1.6
2,315,931	-				-4.2
2,315,931	-				-2.9
2,315,974	+				-0.6
2,315,985	+				-3.7
2,315,989	-				-2.2
2,316,034	-				-1.2
2,316,046	-				-3.8
2,316,092	-				-1.9
2,316,127	+		BT1844	0.16	+0.4
2,316,128	-		BT1844	0.16	-1.6
2,316,130	-		BT1844	0.16	-0.4
2,316,229	+		BT1844	0.36	-2.9
2,316,233	+		BT1844	0.37	-3.5
2,316,233	+				-0.6
2,316,233	+		BT1844	0.37	-1.2
2,316,274	-		BT1844	0.46	-2.4
2,316,337	+		BT1844	0.58	-2.9
2,316,341	-		BT1844	0.59	-2.2
2,316,341	-		BT1844	0.59	-0.0
2,316,394	-		BT1844	0.70	-0.2
2,316,400	+		BT1844	0.71	-1.2
2,316,429	+		BT1844	0.77	-3.8
2,316,429	+		BT1844	0.77	-4.2
2,316,490	-		BT1844	0.89	+0.4
2,316,514	+				-0.6
2,316,568	+				-3.7
2,316,607	+				-2.6
2,316,612	-				-0.6
2,316,618	+				-1.1
2,316,619	-				-2.2
2,316,625	+				-0.9
2,316,628	+				-1.2
2,316,632	+				-1.8
2,316,633	-				-1.2
2,316,642	-				-0.6
2,316,642	-				-1.6
2,316,645	+				-1.2
2,316,682	+				-0.7
2,316,683	-				-0.9
2,316,683	-				-2.8
2,316,683	-				-0.8
2,316,687	-				-2.0
2,316,693	+				-0.7
2,316,697	-				-1.2
2,316,697	-				-2.4
2,316,700	+				-1.2
2,316,825	-		BT1845	0.18	+0.4
2,316,825	-		BT1845	0.18	-0.2
2,316,825	-		BT1845	0.18	-0.8
2,316,826	+		BT1845	0.19	+0.4
2,316,827	-		BT1845	0.19	-0.6