Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1663

Experiment: Amylopectin from Potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)
2,054,655	-		BT1662	0.34	-0.9
2,054,655	-		BT1662	0.34	+0.1
2,054,832	-		BT1662	0.46	+2.0
2,054,836	-		BT1662	0.47	+0.4
2,054,972	-		BT1662	0.56	-1.3
2,054,972	-		BT1662	0.56	+0.4
2,055,162	+		BT1662	0.69	-1.9
2,055,258	+		BT1662	0.76	-2.4
2,055,330	-		BT1662	0.81	-0.2
2,055,332	+		BT1662	0.81	-0.6
2,055,332	+		BT1662	0.81	-0.6
2,055,374	+		BT1662	0.84	-1.9
2,055,375	-		BT1662	0.84	-0.6
2,055,389	+		BT1662	0.85	-0.3
2,055,454	-		BT1662	0.89	+1.4
2,055,612	+				-1.2
2,055,613	-				+0.4
2,055,613	-				+1.1
2,055,650	+				-0.4
2,055,655	-				-0.0
2,055,712	+				-1.2
2,055,727	+				-1.3
2,055,745	+				+1.1
2,055,746	-				+0.4
2,055,753	+				+0.4
2,055,760	-				-1.2
2,055,772	-				-0.2
2,055,775	-				-1.6
2,055,817	-				-1.6
2,055,969	+		BT1663	0.16	+1.0
2,055,970	-		BT1663	0.16	+0.1
2,056,042	-		BT1663	0.20	-1.2
2,056,042	-		BT1663	0.20	-1.2
2,056,044	-		BT1663	0.20	+0.1
2,056,065	+		BT1663	0.21	-1.9
2,056,065	+		BT1663	0.21	-0.2
2,056,150	+		BT1663	0.25	-1.2
2,056,151	-		BT1663	0.25	-0.9
2,056,390	+		BT1663	0.37	-0.2
2,056,390	+		BT1663	0.37	-0.6
2,056,391	-		BT1663	0.37	+0.4
2,056,453	+		BT1663	0.40	-2.4
2,056,453	+		BT1663	0.40	+0.4
2,056,534	-		BT1663	0.44	+0.4
2,056,549	+		BT1663	0.45	-1.6
2,056,549	+		BT1663	0.45	-0.8
2,056,561	+		BT1663	0.45	+0.0
2,056,579	+		BT1663	0.46	+0.4
2,056,580	-		BT1663	0.46	-2.6
2,056,633	+		BT1663	0.49	-1.6
2,056,655	-		BT1663	0.50	-0.6
2,056,659	+		BT1663	0.50	-1.3
2,056,665	+		BT1663	0.51	-1.2
2,056,674	+		BT1663	0.51	-2.3
2,056,675	-		BT1663	0.51	+0.4
2,056,675	-		BT1663	0.51	-0.6
2,056,675	-		BT1663	0.51	-1.2
2,056,728	+		BT1663	0.54	-1.1
2,056,788	+		BT1663	0.57	+0.4
2,056,798	-		BT1663	0.57	-1.2
2,056,805	+		BT1663	0.58	-1.2
2,056,805	+		BT1663	0.58	-0.6
2,056,806	-		BT1663	0.58	-1.2
2,056,806	-		BT1663	0.58	-2.0
2,056,907	+		BT1663	0.63	-0.9
2,056,907	+		BT1663	0.63	-1.2
2,056,927	-		BT1663	0.64	+1.4
2,056,928	+		BT1663	0.64	-0.4
2,056,929	-		BT1663	0.64	+0.8
2,057,169	-		BT1663	0.76	-0.2
2,057,172	+		BT1663	0.76	-0.1
2,057,173	-		BT1663	0.76	-0.3
2,057,173	-		BT1663	0.76	-0.6
2,057,250	+		BT1663	0.80	+0.2
2,057,367	+		BT1663	0.86	+0.4
2,057,367	+		BT1663	0.86	-1.0
2,057,368	-		BT1663	0.86	+2.4
2,057,424	-		BT1663	0.88	+0.9
2,057,464	+				-0.6
2,057,514	+				-0.6
2,057,515	-				-1.1
2,057,517	-				-0.6
2,057,555	-				+0.4
2,057,555	-				+0.4
2,057,561	+				+0.4
2,057,561	+				+0.4
2,057,568	+				-1.8
2,057,571	-				-0.8
2,057,571	-				-0.5
2,057,571	-				+0.4
2,057,589	+				-1.9
2,057,624	-				-0.2
2,057,636	+				-0.5
2,057,656	-				-0.9
2,057,696	-				-0.2
2,057,696	-				-1.0
2,057,707	-				-1.2
2,058,129	-	ruvC	BT_1664	0.68	-2.7
2,058,527	-		BT1665	0.74	-1.6
2,058,595	-				+0.4